Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratitis_20capitata_20[refseq_20GCF_5F000347755.2_202013-03-21]
1,806 sequences; 479,047,742 total letters
Query= NC_007767.1
Length=132959
Score E
Sequences producing significant alignments: (Bits) Value
seq1310 89.7 4e-13
seq145 89.7 4e-13
>seq1310
Length=3030561
Score = 89.7 bits (98), Expect = 4e-13
Identities = 160/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342
|||||||| |||||||||||||| || || || || ||||| || | || ||| ||
Sbjct 644978 AAAATGCAGATTTTTGTCAAAACACTGACTGGTAAGACCATCACTTTGGAGGTCGAG-CC 645036
Query 115343 AGC-GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401
| | ||||| | | | | || ||| ||||| || |||||||| |||| ||
Sbjct 645037 ATCTGACACCATCGAAAATGTCAAAGCCAAAATCCAAGACAAAGAAGGTATCCCACCAGA 645096
Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461
||| ||| | | || | || ||||||||||| ||||||| || || |||||||
Sbjct 645097 TCAACAACGTTTGATCTTCGCCGGCAAACAATTGGAAGATGGTCGCACTTTGTCCGATTA 645156
Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
|| || ||||| ||||| || | || |||||||| | |||| || ||
Sbjct 645157 CAATATCCAAAAGGAGTCAACCCTTCACTTGGTGTTGCGTCTGCGTGGTGG 645207
>seq145
Length=1338480
Score = 89.7 bits (98), Expect = 4e-13
Identities = 142/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344
|||||||||||| || ||||| |||||||| || ||||| || | || || ||
Sbjct 899038 AATGCAAATTTTCGTGAAAACCCTCACGGGTAAGACCATCACTCTTGAGGTCGAACCCTC 898979
Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404
|| ||| | | || || || ||||||| ||||||||||| | ||| |||||
Sbjct 898978 GGATACTATCGAGCATGTTAAGGCAAAAATTCAAGATAAAGAAGGTATTCCCCCCGATCA 898919
Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464
||| | | |||| ||||| |||||| | ||||||| || | || || |||||
Sbjct 898918 ACAACGTTTAATTTTCGCGGGAAAACAACTGGAAGATGGTCGTACTTTAGCTGACTATAA 898859
Query 115465 CATTCAAAAAGAGTCTACTATACA 115488
|| ||||| |||||||| ||||
Sbjct 898858 TATCCAAAAGGAGTCTACCTTACA 898835
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425334637912720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |