Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratitis_20capitata_20[refseq_20GCF_5F000347755.2_202013-03-21] 1,806 sequences; 479,047,742 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq661 89.7 1e-14 >seq661 Length=4306126 Score = 89.7 bits (98), Expect = 1e-14 Identities = 108/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 3334 CCCATGAAGCGAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCTTCG 3393 || ||| ||| |||||||| | | |||| |||||| || |||||||||||||| || Sbjct 3461269 CCAATGGCGCGTGTCTTTCCCAAAGTCACCAAATGTACATTCCACAAATACGGTCCATCC 3461328 Query 3394 GGCTCCCTGGAAAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGAAG 3453 || || || |||| | ||| || ||||| | | || ||| | ||||| ||||| Sbjct 3461329 GGTTCGGTGCAAAAGTTCGATGGGCTCTGTGTGTTGCCATTGAATATTGTCAATGAGAAA 3461388 Query 3454 ATCTACATTTTCCTCTGGTTCTGGTTC 3480 ||||| | ||||| |||||||||||| Sbjct 3461389 ATCTATGTATTCCTATGGTTCTGGTTC 3461415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12479753481000