Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratitis_20capitata_20[refseq_20GCF_5F000347755.2_202013-03-21] 1,806 sequences; 479,047,742 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq322 89.7 4e-13 >seq322 Length=274070 Score = 89.7 bits (98), Expect = 4e-13 Identities = 76/91 (84%), Gaps = 2/91 (2%) Strand=Plus/Minus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588 |||||||| ||| |||||||||||| ||||||||||||| || | |||||| |||||| Sbjct 66742 CATGTATTAGCTTTAGAATTACCACAGTTATCCAAGTAAGTGTTAACGATCTATGGAACC 66683 Query 115589 AAAACTGATATATTGAGCCATTCGTGGTATC 115619 | |||||||||| |||||| || | ||| || Sbjct 66682 ATAACTGATATAATGAGCCTTTTGCGGTTTC 66652 Score = 89.7 bits (98), Expect = 4e-13 Identities = 76/91 (84%), Gaps = 2/91 (2%) Strand=Plus/Minus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391 |||||||| ||| |||||||||||| ||||||||||||| || | |||||| |||||| Sbjct 66742 CATGTATTAGCTTTAGAATTACCACAGTTATCCAAGTAAGTGTTAACGATCTATGGAACC 66683 Query 114392 AAAACTGATATATTGAGCCATTCGTGGTATC 114422 | |||||||||| |||||| || | ||| || Sbjct 66682 ATAACTGATATAATGAGCCTTTTGCGGTTTC 66652 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397053660408412