Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratitis_20capitata_20[refseq_20GCF_5F000347755.2_202013-03-21] 1,806 sequences; 479,047,742 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq1343 188 3e-42 seq2 185 3e-41 seq145 167 9e-36 seq1475 161 4e-34 seq1310 154 6e-32 seq924 138 4e-27 seq454 134 5e-26 seq1609 127 8e-24 seq1069 116 1e-20 seq1553 109 2e-18 seq1762 105 3e-17 seq952 100 1e-15 >seq1343 Length=3569655 Score = 188 bits (208), Expect = 3e-42 Identities = 477/714 (67%), Gaps = 26/714 (4%) Strand=Plus/Minus Query 450905 aaaaaaGTAGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAA 450964 |||| || ||||||||||||||| | ||||| || | || || || || || | |||| Sbjct 968513 AAAATGGTTGCAATTGGAATTGATTTGGGAACAACATACTCCTGCGTTGGAGTCTTCCAA 968454 Query 450965 AATGGAAATGTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTA 451024 |||| || || ||||| || ||||| |||||||| || || || || || | || Sbjct 968453 CATGGTAAAGTGGAAATCATTGCAAACGACCAAGGTAACCGCACAACACC--CA--GCTA 968398 Query 451025 AGT----TTTACGGATTCAGAAAGACTTTTAGGGCAAGCTGCTAAATCAATGGTAAATTC 451080 || || || |||||||| | | | || | || || ||| ||| | || Sbjct 968397 TGTGGCATTCACAGATTCAGAGCGGTTAATCGGAGACGCCGCGAAA--AATC--AGGTTG 968342 Query 451081 AAATG---CCAAA-AACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATG 451136 ||| ||||| |||||||| | ||||| |||||||| ||||| || | ||| ||| Sbjct 968341 CCATGAACCCAAAGAACACAGTTTTCGATGCAAAACGTTTGATTGGACGAAAATATAATG 968282 Query 451137 ATGATACTGTACAAAAAGAGAAAAA--ATTCTTTTCTTATGATGTAGTAAATCAAAAAGG 451194 | | | | || || | || ||| | ||| | || || || | || Sbjct 968281 ACCAAAAAATTCAGGCTGATATGAAGCATTGGCCTTTTACGGTG--GTTAACGACTGCGG 968224 Query 451195 AAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAAT 451254 ||||| | || ||| ||| ||||||||| || | |||||||| |||||||| Sbjct 968223 GAAGCCGAAGATCAGTGTAGATTTTAAAGGTGAGCAGAAGAGCTTTGCTCCAGAAGAAAT 968164 Query 451255 TTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGT 451314 |||||||| | || |||||||| || || || || ||| | || | | || Sbjct 968163 CAGTTCTATGGTGTTGACAAAAATGAAGGAGACTGCTGAGGCATACTTGGGAGCAACGGT 968104 Query 451315 TACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAA 451374 | |||||||||||||| || || ||||| ||||| ||| |||| || ||||| || || Sbjct 968103 GAAGGATGCAGTAATTACAGTACCAGCTTACTTCAACGATTCACAGCGTCAAGCTACAAA 968044 Query 451375 AGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGC 451434 ||| || || |||||||| | ||||||||||||||||| |||||||| |||||||| Sbjct 968043 AGACGCTGGTGCCATTGCTGGACTGAATGTTCTTCGAATTATAAATGAACCAACAGCAGC 967984 Query 451435 TGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATT 451494 ||| | || ||||| || ||| || ||| || || ||| ||| | | |||| Sbjct 967983 AGCTTTGGCGTATGGTCT-GGACAA--AAATCTAAAAGGCGAACGCAATGTGCTCATATT 967927 Query 451495 TGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGG---GGTATT 451551 ||||| || || || || |||| || | || ||||||| || || | || Sbjct 967926 CGATTTAGGAGGTGGTACCTTTGATGTATCAATTCTGACAATTGATGAGGGCTCATTGTT 967867 Query 451552 TGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 ||||| || || ||| ||||| ||| | || ||||||||| |||| || Sbjct 967866 CGAAGTGCGAGCCACAGCTGGCGATACACATTTGGGTGGTGAAGATTTTGACAA 967813 Score = 138 bits (152), Expect = 4e-27 Identities = 158/211 (75%), Gaps = 6/211 (3%) Strand=Plus/Plus Query 451242 CTCCTGAAGAAAT---TTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAAT 451298 |||| |||||||| ||||| |||| | | |||||||||||| | || ||| || Sbjct 971954 CTCCCGAAGAAATCAGTTCAT---TGGTGTTGATTAAAATGAAAGAGGCTGCCGAAGCAT 972010 Query 451299 ATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCAC 451358 || | || | |||| | |||||||| ||||| || || ||||| ||||| || | | Sbjct 972011 ATCTGGGAACAACAGTGAAGGATGCAGTCATTACAGTACCAGCTTACTTCAAAGACGTTC 972070 Query 451359 AACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTA 451418 | || || || || ||||| || || |||||||| || ||||||||||||||||| | Sbjct 972071 AGCGCCAGGCTACAAAAGACGCTGGTGCCATTGCTGGATTGAATGTTCTTCGAATTATAA 972130 Query 451419 ATGAACCTACAGCAGCTGCTCTAGCATATGG 451449 ||||||| |||||||| ||| |||| ||||| Sbjct 972131 ATGAACCAACAGCAGCAGCTTTAGCGTATGG 972161 Score = 129 bits (142), Expect = 2e-24 Identities = 197/277 (71%), Gaps = 8/277 (3%) Strand=Plus/Minus Query 451991 AATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGT--T 452048 || || || || || || ||||| ||||| || |||||||||| ||| ||| || | Sbjct 967427 AACCCAGACGAGGCGGTAGCATACGGTGCAGCGATTCAAGCAGCAATTTTAAGTGGAGAT 967368 Query 452049 CAGATGATGAAAAATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAG 452108 ||| | ||| | |||| || || |||||||||||| |||| | || |||||| Sbjct 967367 AAGAGTAGTCAAATTCAGGACGTA--CTTTTAGTAGATGTAGCACCATTGTCGCTTGGAA 967310 Query 452109 TTGAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGAACTTC--TATTCCTTG 452166 ||||||| ||||||||| | ||||| || |||| | ||| ||| | |||||| || Sbjct 967309 TTGAAACTGCTGGTGGAGTTATGACAAAACTAATCGAGCGA--AACAGCCGTATTCCATG 967252 Query 452167 TAAAAAGAGTCAAACATTTAGTACAGCAAGTGATAACCAACCAGGTGTAACTATTCAAGT 452226 ||| | | |||| |||| || ||||||||||||| ||| || |||||||| Sbjct 967251 CAAACAATCTAAAACCTTTACAACTTATGCGGATAACCAACCAGCTGTTACCATTCAAGT 967192 Query 452227 GTTTGAAGGAGAACGTGCAATGACACGAGATAATAAT 452263 |||||||| ||| | || ||||| |||||| ||| Sbjct 967191 ATTTGAAGGCGAAAGGGCTATGACCAAAGATAACAAT 967155 >seq2 Length=11030136 Score = 185 bits (204), Expect = 3e-41 Identities = 462/695 (66%), Gaps = 15/695 (2%) Strand=Plus/Minus Query 450918 TTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAATGTAG 450977 |||| |||||| | || || |||| || ||||| ||||| | ||| | || || || | Sbjct 7090924 TTGGTATTGATTTGGGTACTACCTACTCCTGTGTGGGTGTATTCCAGCACGGCAAAGTTG 7090865 Query 450978 AAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTACGGATT 451037 | || || || |||||||| || || ||||| || |||| || || || || Sbjct 7090864 AGATCATTGCCAATGACCAGGGTAATCGCACTACCCCATCATATGTTGCCTTCACCGAGA 7090805 Query 451038 CAGAAAGACTTTTAGGGCAAGCTGCTAA--ATCAATGGTAAATTCAAATGCCAAAAACAC 451095 |||| | || | || | ||||| || |||| ||| || | | |||||| Sbjct 7090804 CAGAGCGTCTGATCGGCGATGCTGCCAAGAATCA--GGTTGCCATGAACCCTACAAACAC 7090747 Query 451096 AGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAAAAAGA 451155 | | ||||| || ||||| |||||||||| | ||||||| || ||||||| || Sbjct 7090746 CATTTTCGATGCCAAGCGTTTGATTGGCCGTAAATTCGATGATGCTAATGTACAATCTGA 7090687 Query 451156 GAAAAA--ATT--CTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCAAG 451211 | || ||| | ||| || || || | | | || || || | || | Sbjct 7090686 TATGAAGCATTGGCCATTC----GAAGTGGTTAGTGCTGATGGCAAACCAAAGATCAGTG 7090631 Query 451212 TAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTA 451271 | || |||| ||||| |||||||| || || || || ||||||||||| | | Sbjct 7090630 TCTCCTACAAAGATGAAAAGAAAACTTTCTTCCCAGAGGAGATCTCATCTATGGTGTTGA 7090571 Query 451272 CTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTA 451331 |||| ||||| ||||| || ||| || | || | ||||| | || || || | Sbjct 7090570 CTAAGATGAAGGAAACCGCTGAAGCCTACTTGGGCAAGACTGTTACCAACGCCGTCATCA 7090511 Query 451332 CTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTG 451391 |||| ||||| || ||||| ||| | ||||| ||||| || || ||||| || |||| Sbjct 7090510 CTGTACCCGCATACTTCAACGATTCTCAACGTCAAGCTACCAAGGATGCCGGTACCATTG 7090451 Query 451392 CTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGAC 451451 ||||||||||||| | || |||||||| || ||||| || |||||| | || || || Sbjct 7090450 CTGGTTTAAATGTATTGCGTATTATTAACGAGCCTACCGCTGCTGCTATTGCGTACGG-T 7090392 Query 451452 TAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAA 451511 | ||| || |||| | ||| ||| | || | || ||||| ||||| || | Sbjct 7090391 TTGGACAA--GAAAGCTGTTGGTGAACGCAATGTATTGATCTTCGATTTGGGTGGTGGTA 7090334 Query 451512 CTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATG 451571 || |||| || | || ||||| || ||||| | ||||| || ||| ||||| || Sbjct 7090333 CTTTTGATGTGTCCATTCTATCAATCGATGATGGTATCTTTGAGGTCAAGTCAACCGCTG 7090274 Query 451572 GTGATACTCATCTAGGAGGTGAAGATATTGATAAT 451606 |||| ||||| | || ||||||||| | || ||| Sbjct 7090273 GTGACACTCACTTGGGTGGTGAAGATTTCGACAAT 7090239 Score = 109 bits (120), Expect = 2e-18 Identities = 319/487 (66%), Gaps = 6/487 (1%) Strand=Plus/Minus Query 451991 AATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCA 452050 ||||| ||||||||||| || || |||||||| || ||||| ||||| || || | | | Sbjct 7089854 AATCCCGATGAAGCTGTAGCTTACGGTGCTGCCGTCCAAGCTGCTAT-CTTGCATGGTGA 7089796 Query 452051 GATGATGAAA-AATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGT 452109 | | | | || || ||| | || | | ||||| || || || || | || | Sbjct 7089795 TAAGTCGCAGGAAGTACAAGACTTGTTGCTTCTCGATGTTACTCCCCTGTCATTGGGTAT 7089736 Query 452110 TGAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGAACTTCTATTCCTTGTAA 452169 |||||| ||||| || |||||| | || || || || || | ||||| || Sbjct 7089735 TGAAACCGCTGGCGGCGTGATGAGTGTCTTGATCAAGCGTAACACAACCATTCCAACCAA 7089676 Query 452170 AAAGAGTCAAACATTTAGTACAGCAAGT--GATAACCAACCAGGTGTAACTATTCAAGTG 452227 ||| ||| ||||| | ||| | | | ||||| ||||| |||||| |||||||| Sbjct 7089675 GCAGACTCAGACATTCACTAC--CTACTCAGATAATCAACCTGGTGTATTGATTCAAGTA 7089618 Query 452228 TTTGAAGGAGAACGTGCAATGACACGAGATAATAATAAACTAGGAGAATTTACTCTTTCA 452287 | |||||| |||||||||||||| || || ||| || ||| |||| | || Sbjct 7089617 TATGAAGGTGAACGTGCAATGACCAAGGACAACAATCTGCTTGGAAAATTCGAGTTGTCT 7089558 Query 452288 AACATTCCTCCTATGCCAAGGGGAACTCCTCAAATTGAAATTACCTATGATGTTGATGCA 452347 ||||| || ||| | || |||||||||||| | |||| || ||||||| Sbjct 7089557 GGTATTCCACCAGCACCACGTGGTGTACCTCAAATTGAAGTAACCTTCGACATTGATGCC 7089498 Query 452348 AATGGTATTCTTAATGTGAGTGCAGTTGAAAAATCATCTGGAAAATCAGAAAAAATTACA 452407 || ||||| | || || | || | ||| || | || | | || ||||| Sbjct 7089497 AACGGTATCTTGAACGTAACCGCTTTGGAACGTTCCACCAACAAGGAAAACAAGATTACC 7089438 Query 452408 ATTACTAATGATAAAAACCGTTTATCTAAAGAAGATATTGAAAAAATGGTAGATGAAGCA 452467 || ||||| || || ||| |||| || ||||| || ||| ||||| | ||||| Sbjct 7089437 ATCACTAACGACAAGGGTCGTCTATCGAAGGAAGACATCGAACGTATGGTCAACGAAGCC 7089378 Query 452468 GAAAAAT 452474 || |||| Sbjct 7089377 GAGAAAT 7089371 >seq145 Length=1338480 Score = 167 bits (184), Expect = 9e-36 Identities = 163/210 (78%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | |||||||| ||||| || || ||||| || || |||||||| || ||| | || Sbjct 899038 AATGCAAATTTTCGTGAAAACCCTCACGGGTAAGACCATCACTCTTGAGGTCGAACCCTC 898979 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 |||| || || | |||| ||||||||||||||| ||||| ||||| || ||||| Sbjct 898978 GGATACTATCGAGCATGTTAAGGCAAAAATTCAAGATAAAGAAGGTATTCCCCCCGATCA 898919 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 |||||||||||||||| | || |||||||| |||||||| | ||||| || || ||||| Sbjct 898918 ACAACGTTTAATTTTCGCGGGAAAACAACTGGAAGATGGTCGTACTTTAGCTGACTATAA 898859 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGT 391258 ||| | ||||| | || | |||||||| Sbjct 898858 TATCCAAAAGGAGTCTACCTTACACTTAGT 898829 >seq1475 Length=10956678 Score = 161 bits (178), Expect = 4e-34 Identities = 257/366 (70%), Gaps = 6/366 (2%) Strand=Plus/Minus Query 451238 TTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAA 451297 ||||| || |||||||| || |||||||| | ||||||||| ||||| || || Sbjct 1965695 TTTGCACCAGAAGAAATATCTGCTATGGTTTTGGGTAAAATGAAGGAAACGGCCGAGGCC 1965636 Query 451298 TATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCA 451357 ||| |||| ||||| | || ||| |||| ||||| ||||||||||||||||| Sbjct 1965635 TATCTTGGCAAGAAGGTTACACACGCTGTAGTTACAGTTCCAGCTTATTTCAATGATGCT 1965576 Query 451358 CAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATT 451417 ||||| || || || |||||||| || ||||| ||| | || ||| | || ||||| Sbjct 1965575 CAACGTCAGGCTACCAAAGATGCTGGCGTCATTGCCGGTCTGAACGTTATGCGTATTATC 1965516 Query 451418 AATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaa 451477 ||||||||||| || |||||| | || || || | ||| || || || || ||| Sbjct 1965515 AATGAACCTACTGCTGCTGCTATTGCCTACGG-TTTGGATAA--GAAGGA---AGGCGAA 1965462 Query 451478 aaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATT 451537 || || | || || || ||||| || || || ||| |||| || | | | || Sbjct 1965461 AAGAACGTGTTGGTGTTCGATTTGGGCGGTGGTACTTTTGATGTCTCGTTGTTGACCATC 1965402 Query 451538 GAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGAT 451597 || |||| || || || || | | ||||||||||||||||| | || ||||||||| Sbjct 1965401 GATAATGGTGTTTTCGAGGTTATTTCTACCAATGGTGATACTCACTTGGGTGGTGAAGAT 1965342 Query 451598 ATTGAT 451603 | ||| Sbjct 1965341 TTCGAT 1965336 >seq1310 Length=3030561 Score = 154 bits (170), Expect = 6e-32 Identities = 162/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | ||||| || ||||||||||||||||| || || ||| | || || || |||| Sbjct 644980 AATGCAGATTTTTGTCAAAACACTGACTGGTAAGACCATCACTTTGGAGGTCGAGCCATC 645039 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||| | ||| ||| | | ||| ||||| ||||| || ||||| || || || ||||| Sbjct 645040 TGACACCATCGAAAATGTCAAAGCCAAAATCCAAGACAAAGAAGGTATCCCACCAGATCA 645099 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||||||||| || ||| | || |||||| | |||||||| | |||||| | ||||| || Sbjct 645100 ACAACGTTTGATCTTCGCCGGCAAACAATTGGAAGATGGTCGCACTTTGTCCGATTACAA 645159 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATT 391261 ||| | ||||| |||| |||||||| || || Sbjct 645160 TATCCAAAAGGAGTCAACCCTTCACTTGGTGTT 645192 >seq924 Length=13938904 Score = 138 bits (152), Expect = 4e-27 Identities = 337/508 (66%), Gaps = 11/508 (2%) Strand=Plus/Minus Query 451103 GATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAAAAAGAGA--AAA 451160 ||||| |||||| | |||||||| | || ||||||| || || || | || | ||| Sbjct 3301734 GATGCGAAACGTCTGATTGGCCGCAAGTTCGATGATGCCACAGTGCAGAGCGACATGAAA 3301675 Query 451161 AATT--CTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCAAGTAAATTA 451218 ||| | ||| || || | ||| | || || ||||| | || | | | || Sbjct 3301674 CATTGGCCATTC----GAGGTCTTCAATGATAATGGCAAGCCGAAAATGCGTATTGAATA 3301619 Query 451219 TAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAAT 451278 ||| ||||| | || | || ||| || || || || || ||||| | || || || Sbjct 3301618 TAAGGGTGAGAAGAAGAGCTTCTTTCCGGAGGAGATCTCTTCGATGGTATTGACAAAGAT 3301559 Query 451279 GAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCC 451338 ||| ||||| || ||| || || || | ||||| ||||| || | ||||| || Sbjct 3301558 GAAGGAAACCGCCGAAGCTTACATGGGCAAGACTGTTACGGATGCTGTTGTCACTGTGCC 3301499 Query 451339 CGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTT 451398 || |||||||| ||| ||||||| ||||| || || ||||| || |||||| ||| | Sbjct 3301498 AGCCTATTTCAACGATTCACAACGTCAAGCCACCAAGGATGCGGGCGCTATTGCCGGTCT 3301439 Query 451399 AAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAA 451458 ||||| || || || ||||||||||| || || || || | || ||||| || | || Sbjct 3301438 GAATGTGCTACGTATCATTAATGAACCCACCGCTGCAGCCATTGCTTATGGTCTCGACAA 3301379 Query 451459 ATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGA 451518 || | || ||| ||| | || | || ||||| ||||| || ||| || Sbjct 3301378 ---GAAGGGCACTAGTGAACGTAATGTATTGATTTTCGATTTGGGTGGCGGCACTTTCGA 3301322 Query 451519 TACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATAC 451578 | || |||| | ||||| ||||| | ||||| || ||| | || || ||||| Sbjct 3301321 TGTGTCCATACTCACCATTGAGGATGGCATCTTTGAGGTTAAGTCCACGGCGGGCGATAC 3301262 Query 451579 TCATCTAGGAGGTGAAGATATTGATAAT 451606 ||| | || || |||||| | || ||| Sbjct 3301261 ACATTTGGGCGGCGAAGATTTCGACAAT 3301234 >seq454 Length=983520 Score = 134 bits (148), Expect = 5e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || |||||||| || |||| || ||||| || ||| | || || ||| |||| Sbjct 254903 ATGCAAATCTTCGTTAAGACCTTGACCGGCAAAACCATCACTTTGGAGGTCGAACCATCA 254844 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||| || | | || || || |||||||||||||| ||||| || |||||| Sbjct 254843 GATACCATCGAGAATGTCAAGGCCAAGATCCAAGATAAGGAAGGTATTCCCCCAGATCAA 254784 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||||| ||||| | || |||||||| ||||| ||| | |||||| | || || || Sbjct 254783 CAACGTTTGATTTTTGCCGGCAAACAACTGGAAGACGGACGCACTTTGTCTGACTACAAC 254724 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATT 391261 || | ||||| | || ||||| || ||||| Sbjct 254723 ATCCAAAAGGAGTCTACCCTTCATTTGGTATT 254692 Score = 122 bits (134), Expect = 3e-22 Identities = 136/182 (75%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||||||||| |||| || ||||| || || | || ||||| ||||| Sbjct 254447 ATGCAAATTTTCGTTAAAACTTTGACCGGCAAAACCATCACCTTGGAAGTTGAGCCATCT 254388 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| |||||| | | || ||||| ||||| |||||||| ||||| || |||||| Sbjct 254387 GATACCATTGAGAATGTGAAGGCTAAAATCCAAGACAAGGAAGGTATTCCCCCAGATCAA 254328 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||||| || || | || || || | ||||||||| | |||||| | || || || Sbjct 254327 CAACGTTTGATCTTTGCCGGCAAGCAGTTGGAAGATGGACGCACTTTGTCTGACTACAAC 254268 Query 391230 AT 391231 || Sbjct 254267 AT 254266 Score = 113 bits (124), Expect = 2e-19 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || |||||||| || |||| || ||||| || ||| | || |||||| |||| Sbjct 254675 ATGCAAATCTTCGTTAAGACCTTGACCGGCAAAACCATCACTTTGGAGGTTGAACCATCA 254616 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||| || | | || || || || || |||||||| |||||||| |||||| Sbjct 254615 GATACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGTATTCCTCCAGATCAA 254556 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||||| || || | || || || || ||||||||| | || ||| | || || || Sbjct 254555 CAACGTTTGATCTTTGCCGGCAAGCAGCTAGAAGATGGACGCACCTTGTCCGACTACAAC 254496 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATT 391261 || | ||||| | || || || || || || Sbjct 254495 ATCCAAAAGGAATCTACTCTCCATTTGGTCTT 254464 Score = 102 bits (112), Expect = 3e-16 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||||||||| || |||| || || || || || | || || ||| |||| Sbjct 253736 ATGCAAATTTTCGTTAAGACTTTGACGGGCAAGACCATCACCTTGGAAGTCGAACCATCA 253677 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||| || | | || || || ||||| |||||||| || ||||| |||||| Sbjct 253676 GATACCATCGAGAATGTGAAGGCCAAGATCCAAGACAAGGAAGGTATCCCTCCAGATCAA 253617 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||||| |||||| | || || || || ||||||||| | || || | || || || Sbjct 253616 CAGCGTTTGATTTTCGCTGGTAAGCAGCTGGAAGATGGACGTACATTATCCGACTACAAC 253557 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 || | ||||| | || || || || || Sbjct 253556 ATCCAAAAGGAATCTACCCTCCATTTGGT 253528 >seq1609 Length=2343729 Score = 127 bits (140), Expect = 8e-24 Identities = 271/399 (68%), Gaps = 8/399 (2%) Strand=Plus/Minus Query 451220 AAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATG 451279 || ||||||| ||| |||||| ||||| ||||| || ||||| | || || ||| Sbjct 2177448 AAGGGTGAAATGAAACGTTTTGCACCTGAGGAAATCAGTTCAATGGTATTGACGAAGATG 2177389 Query 451280 AAAGAAACAGCAGAACAATATATTGGTTCTCCAG-TTACTGATGCAGTAATTACTGTTCC 451338 || | || ||| ||| |||| | | || |||| ||||| || |||||||| || Sbjct 2177388 CGTGAGATCGCCGAAGTCTAT-TTGGGTGGCAAGGTTACCGATGCCGTTATTACTGTGCC 2177330 Query 451339 CGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTT 451398 || ||||||||||| ||||| ||||| || |||||||| || |||||||| | Sbjct 2177329 GGCCTATTTCAATGACAGCCAACGTCAAGCCACCAAAGATGCCGGTTCCATTGCTGGCCT 2177270 Query 451399 AAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAA 451458 ||||| || || ||||| |||||||| || || |||||| | || || || | ||| | Sbjct 2177269 CAATGTGCTGCGTATTATAAATGAACCCACCGCTGCTGCTTTGGCCTACGG-TTTGGATA 2177211 Query 451459 ATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGA 451518 | | ||| | ||||| ||| | | | |||||||| || || || ||| ||| Sbjct 2177210 AGAATTTGAA--GGGTGAAAAGAATGTGCTGATTTTTGATTTGGGCGGTGGTACTTTTGA 2177153 Query 451519 TACTTCTGTACTTTCAATTGAAGATGG---GGTATTTGAAGTAAAGGCAACCAATGGTGA 451575 | || | | || ||||| || || | || || || || | || ||| || Sbjct 2177152 TGTGTCCATTTTGTCCATTGATGAGGGCTCACTGTTCGAGGTGAAATCGACAGCTGGCGA 2177093 Query 451576 TACTCATCTAGGAGGTGAAGATATTGATAATGCAATTGT 451614 ||| ||| | || || |||||| |||||||| | |||| Sbjct 2177092 TACACATTTGGGCGGCGAAGATTTTGATAATCGACTTGT 2177054 >seq1069 Length=4782749 Score = 116 bits (128), Expect = 1e-20 Identities = 254/388 (65%), Gaps = 47/388 (12%) Strand=Plus/Plus Query 451274 AAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACT 451333 |||||||||||||| ||||| |||| || | | || |||| |||| || | || Sbjct 966298 AAAATGAAAGAAACCGCAGAGGCATATCTTAATACACCGGTTAAGAATGCTGTTGTCACA 966357 Query 451334 GTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCT 451393 || || ||||||||||| || | || || || || || |||||||| || || || || Sbjct 966358 GTGCCGGCTTATTTCAACGACTCGCAGCGTCAGGCCACCAAAGATGCTGGTCAAATAGCC 966417 Query 451394 GGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCAT-----ATG 451448 ||||| || || | || ||||||||||||||||||| ||||| || || | ||| Sbjct 966418 GGTTTGAACGTGTTGCGTGTTATTAATGAACCTACAGCTGCTGCGCTGGCCTACGGCATG 966477 Query 451449 GACTAG---GAAAATCAAAAGAAACAGA--------AGaaa------------aaaaTAT 451485 ||| || || || ||| | || | | ||||| | ||||| Sbjct 966478 GACAAGACAGATGATAAAATGTAATAAAATTTTCTTAGAAATATTCAATGATTATAATAT 966537 Query 451486 TTT-------------------AGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTG 451526 ||| ||||| |||||| ||||| ||||| |||| ||| Sbjct 966538 TTTCGTATATTTTTAGTATTGCAGTATATGATTTAGGTGGTGGAACCTTCGATATTTCAA 966597 Query 451527 TACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAG 451586 | ||| |||| || | || || || ||||||||| | ||||| || ||||| || | Sbjct 966598 TTCTTGAAATTCAAAAGGGAGTTTTCGAAGTAAAGTCTACCAACGGCGATACGTTGCTTG 966657 Query 451587 GAGGTGAAGATATTGATAATGCAATTGT 451614 | ||||||||| ||||||| | ||||| Sbjct 966658 GCGGTGAAGATTTTGATAACACTATTGT 966685 >seq1553 Length=1510826 Score = 109 bits (120), Expect = 2e-18 Identities = 164/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 451217 TATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAA 451276 || ||||| |||| ||| || || || |||||||| || ||||| | || || Sbjct 1502290 TACAAAGGAGAAAACAAACGATTCGCACCAGAAGAAATCAGTTCCATGGTGTTGACCAAG 1502231 Query 451277 ATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTT 451336 ||||| || || ||||| ||| | || | |||| || || || || || || || Sbjct 1502230 ATGAAGGAGACCGCAGAGGCTTATCTGGGCACAACAGTAACAGACGCGGTCATCACAGTG 1502171 Query 451337 CCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGT 451396 || || ||||||||||| |||| || || || || || ||||| || | ||||||||| Sbjct 1502170 CCTGCATATTTCAATGACTCACAGCGACAGGCGACAAAGGATGCTGGTCGAATTGCTGGT 1502111 Query 451397 TTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGG 451449 || ||||| | ||||| || || ||||| || || || ||| |||| || || Sbjct 1502110 TTGAATGTGTTACGAATCATCAACGAACCCACTGCCGCCGCTTTAGCTTACGG 1502058 Score = 105 bits (116), Expect = 3e-17 Identities = 163/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 451217 TATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAA 451276 || ||||| |||| ||| || || || |||||||| || ||||| | || || Sbjct 1493255 TACAAAGGAGAAAACAAACGATTCGCACCAGAAGAAATCAGTTCCATGGTGTTGACCAAG 1493196 Query 451277 ATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTT 451336 ||||| || || ||||| ||| | || | |||| || || || || || || || Sbjct 1493195 ATGAAGGAGACCGCAGAGGCTTATCTGGGCACAACAGTAACAGACGCGGTCATCACAGTG 1493136 Query 451337 CCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGT 451396 || || |||||||| || |||| || || || || || ||||| || | ||||||||| Sbjct 1493135 CCTGCATATTTCAACGACTCACAGCGTCAGGCGACAAAGGATGCTGGTCGAATTGCTGGT 1493076 Query 451397 TTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGG 451449 || ||||| | ||||| || || ||||| || || || ||| |||| || || Sbjct 1493075 TTGAATGTGTTACGAATCATCAACGAACCCACTGCCGCCGCTTTAGCTTACGG 1493023 >seq1762 Length=809008 Score = 105 bits (116), Expect = 3e-17 Identities = 299/464 (64%), Gaps = 0/464 (0%) Strand=Plus/Plus Query 501060 TTTGCTTTCTATTTAGAACCTCATCATGCGGATATATTTGATTTTTTGGAACTACGAAAA 501119 |||||| | || || || ||| || || ||||| ||||| |||||||| || ||| Sbjct 694108 TTTGCTATATACTTGGAGCCTTGGCACGCTGATATTTTTGAATTTTTGGATTTAAAGAAA 694167 Query 501120 AATACTGGTGCCGAATCAGAAAGAGCCCGTGATTTATTTTTAGCATTATGGGTTTCTGAC 501179 ||||| || || | |||| | |||||||||| || || ||| | ||||| Sbjct 694168 AATACCGGAAAAGAGGAGCATCGAGCTAGAGATTTATTTTATGCTTTGTGGATACCTGAC 694227 Query 501180 TTATTTATGAATCAGGTTAAATTAAATAATGATTGGTATTTATTTTGTCCAGACAAAGCA 501239 ||||||||||| | ||| || |||| | ||||||| ||| | |||||| | || Sbjct 694228 TTATTTATGAAGCGTGTTGAAGCAAATGAGGATTGGTCATTAATGTGTCCACATAAGTGT 694287 Query 501240 CCAGGATTAAATGATGTATATGGAGATGAATATGAAACTCTTTATTGGAAATATGTATCA 501299 || |||||| | || || | || || |||| |||| | || ||||||| | | Sbjct 694288 CCCGGATTACACGAAGTTTGGGGTGAAGAATTCGAAAAGTTATACACAAAATATGAACAA 694347 Query 501300 GAAGAAAAATNNNNNNNNNNNNNNAAAGCCCGGAAATTATGGGAAGCTATAATGACAGCA 501359 |||| | ||||||| | | ||| | || || | | Sbjct 694348 GAAGGACGTGCTAATAAGAAAGTTAAAGCCCAAAGCCTTTGGTTTTCCATTATAGAATCG 694407 Query 501360 CAGTTTGAAACTGGTTCACCCtatatgttatataaagataatattaataaaaaatcaaac 501419 ||| | || || || |||| |||||||||||||| ||| | ||||| ||| || Sbjct 694408 CAGGTGGAGACGGGCACACCGTATATGTTATATAAGGATGCTTGTAATAGAAAGAGTAAT 694467 Query 501420 cagaaaaatataggaataatTAGAAGTTCAAATTTATGTGCTGAAATTGTAGAATATTCA 501479 || | ||||| || | ||||| | | |||||||| | |||||||| || |||||| Sbjct 694468 CAACAGAATATTGGCACAATTAAATGCAGTAATTTATGCACAGAAATTGTTGAGTATTCA 694527 Query 501480 GATTCTACTGAAACAGCTGCTTGTAATTTAGCTTCAATTGCTCT 501523 | || || ||||| || |||||||| || ||||| || Sbjct 694528 GCACCTGACGAGGTAGCTGTATGCAATTTAGCATCGATTGCCCT 694571 >seq952 Length=408348 Score = 100 bits (110), Expect = 1e-15 Identities = 162/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 451217 TATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAA 451276 || ||||| |||| ||| || || || |||||||| || ||||| | || || Sbjct 377272 TACAAAGGAGAAAACAAACGATTCGCACCAGAAGAAATCAGTTCCATGGTGTTGACCAAG 377213 Query 451277 ATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTT 451336 ||||| || || || || ||| | || | |||| || || || || || || || Sbjct 377212 ATGAAGGAGACCGCTGAGGCTTATCTGGGCACAACAGTAACAGACGCGGTCATCACAGTG 377153 Query 451337 CCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGT 451396 || || ||||| ||||| |||| || || || || || ||||| || | ||||||||| Sbjct 377152 CCTGCATATTTTAATGACTCACAGCGACAGGCGACAAAGGATGCTGGTCGAATTGCTGGT 377093 Query 451397 TTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGG 451449 || ||||| | ||||| || || ||||| || || || ||| |||| || || Sbjct 377092 TTGAATGTGTTGCGAATCATCAACGAACCCACTGCCGCCGCTTTAGCTTACGG 377040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975672683111048