Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratitis_20capitata_20[refseq_20GCF_5F000347755.2_202013-03-21]
1,806 sequences; 479,047,742 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq1343 188 3e-42
seq2 185 3e-41
seq145 167 9e-36
seq1475 161 4e-34
seq1310 154 6e-32
seq924 138 4e-27
seq454 134 5e-26
seq1609 127 8e-24
seq1069 116 1e-20
seq1553 109 2e-18
seq1762 105 3e-17
seq952 100 1e-15
>seq1343
Length=3569655
Score = 188 bits (208), Expect = 3e-42
Identities = 477/714 (67%), Gaps = 26/714 (4%)
Strand=Plus/Minus
Query 450905 aaaaaaGTAGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAA 450964
|||| || ||||||||||||||| | ||||| || | || || || || || | ||||
Sbjct 968513 AAAATGGTTGCAATTGGAATTGATTTGGGAACAACATACTCCTGCGTTGGAGTCTTCCAA 968454
Query 450965 AATGGAAATGTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTA 451024
|||| || || ||||| || ||||| |||||||| || || || || || | ||
Sbjct 968453 CATGGTAAAGTGGAAATCATTGCAAACGACCAAGGTAACCGCACAACACC--CA--GCTA 968398
Query 451025 AGT----TTTACGGATTCAGAAAGACTTTTAGGGCAAGCTGCTAAATCAATGGTAAATTC 451080
|| || || |||||||| | | | || | || || ||| ||| | ||
Sbjct 968397 TGTGGCATTCACAGATTCAGAGCGGTTAATCGGAGACGCCGCGAAA--AATC--AGGTTG 968342
Query 451081 AAATG---CCAAA-AACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATG 451136
||| ||||| |||||||| | ||||| |||||||| ||||| || | ||| |||
Sbjct 968341 CCATGAACCCAAAGAACACAGTTTTCGATGCAAAACGTTTGATTGGACGAAAATATAATG 968282
Query 451137 ATGATACTGTACAAAAAGAGAAAAA--ATTCTTTTCTTATGATGTAGTAAATCAAAAAGG 451194
| | | | || || | || ||| | ||| | || || || | ||
Sbjct 968281 ACCAAAAAATTCAGGCTGATATGAAGCATTGGCCTTTTACGGTG--GTTAACGACTGCGG 968224
Query 451195 AAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAAT 451254
||||| | || ||| ||| ||||||||| || | |||||||| ||||||||
Sbjct 968223 GAAGCCGAAGATCAGTGTAGATTTTAAAGGTGAGCAGAAGAGCTTTGCTCCAGAAGAAAT 968164
Query 451255 TTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGT 451314
|||||||| | || |||||||| || || || || ||| | || | | ||
Sbjct 968163 CAGTTCTATGGTGTTGACAAAAATGAAGGAGACTGCTGAGGCATACTTGGGAGCAACGGT 968104
Query 451315 TACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAA 451374
| |||||||||||||| || || ||||| ||||| ||| |||| || ||||| || ||
Sbjct 968103 GAAGGATGCAGTAATTACAGTACCAGCTTACTTCAACGATTCACAGCGTCAAGCTACAAA 968044
Query 451375 AGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGC 451434
||| || || |||||||| | ||||||||||||||||| |||||||| ||||||||
Sbjct 968043 AGACGCTGGTGCCATTGCTGGACTGAATGTTCTTCGAATTATAAATGAACCAACAGCAGC 967984
Query 451435 TGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATT 451494
||| | || ||||| || ||| || ||| || || ||| ||| | | ||||
Sbjct 967983 AGCTTTGGCGTATGGTCT-GGACAA--AAATCTAAAAGGCGAACGCAATGTGCTCATATT 967927
Query 451495 TGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGG---GGTATT 451551
||||| || || || || |||| || | || ||||||| || || | ||
Sbjct 967926 CGATTTAGGAGGTGGTACCTTTGATGTATCAATTCTGACAATTGATGAGGGCTCATTGTT 967867
Query 451552 TGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605
||||| || || ||| ||||| ||| | || ||||||||| |||| ||
Sbjct 967866 CGAAGTGCGAGCCACAGCTGGCGATACACATTTGGGTGGTGAAGATTTTGACAA 967813
Score = 138 bits (152), Expect = 4e-27
Identities = 158/211 (75%), Gaps = 6/211 (3%)
Strand=Plus/Plus
Query 451242 CTCCTGAAGAAAT---TTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAAT 451298
|||| |||||||| ||||| |||| | | |||||||||||| | || ||| ||
Sbjct 971954 CTCCCGAAGAAATCAGTTCAT---TGGTGTTGATTAAAATGAAAGAGGCTGCCGAAGCAT 972010
Query 451299 ATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCAC 451358
|| | || | |||| | |||||||| ||||| || || ||||| ||||| || | |
Sbjct 972011 ATCTGGGAACAACAGTGAAGGATGCAGTCATTACAGTACCAGCTTACTTCAAAGACGTTC 972070
Query 451359 AACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTA 451418
| || || || || ||||| || || |||||||| || ||||||||||||||||| |
Sbjct 972071 AGCGCCAGGCTACAAAAGACGCTGGTGCCATTGCTGGATTGAATGTTCTTCGAATTATAA 972130
Query 451419 ATGAACCTACAGCAGCTGCTCTAGCATATGG 451449
||||||| |||||||| ||| |||| |||||
Sbjct 972131 ATGAACCAACAGCAGCAGCTTTAGCGTATGG 972161
Score = 129 bits (142), Expect = 2e-24
Identities = 197/277 (71%), Gaps = 8/277 (3%)
Strand=Plus/Minus
Query 451991 AATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGT--T 452048
|| || || || || || ||||| ||||| || |||||||||| ||| ||| || |
Sbjct 967427 AACCCAGACGAGGCGGTAGCATACGGTGCAGCGATTCAAGCAGCAATTTTAAGTGGAGAT 967368
Query 452049 CAGATGATGAAAAATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAG 452108
||| | ||| | |||| || || |||||||||||| |||| | || ||||||
Sbjct 967367 AAGAGTAGTCAAATTCAGGACGTA--CTTTTAGTAGATGTAGCACCATTGTCGCTTGGAA 967310
Query 452109 TTGAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGAACTTC--TATTCCTTG 452166
||||||| ||||||||| | ||||| || |||| | ||| ||| | |||||| ||
Sbjct 967309 TTGAAACTGCTGGTGGAGTTATGACAAAACTAATCGAGCGA--AACAGCCGTATTCCATG 967252
Query 452167 TAAAAAGAGTCAAACATTTAGTACAGCAAGTGATAACCAACCAGGTGTAACTATTCAAGT 452226
||| | | |||| |||| || ||||||||||||| ||| || ||||||||
Sbjct 967251 CAAACAATCTAAAACCTTTACAACTTATGCGGATAACCAACCAGCTGTTACCATTCAAGT 967192
Query 452227 GTTTGAAGGAGAACGTGCAATGACACGAGATAATAAT 452263
|||||||| ||| | || ||||| |||||| |||
Sbjct 967191 ATTTGAAGGCGAAAGGGCTATGACCAAAGATAACAAT 967155
>seq2
Length=11030136
Score = 185 bits (204), Expect = 3e-41
Identities = 462/695 (66%), Gaps = 15/695 (2%)
Strand=Plus/Minus
Query 450918 TTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAATGTAG 450977
|||| |||||| | || || |||| || ||||| ||||| | ||| | || || || |
Sbjct 7090924 TTGGTATTGATTTGGGTACTACCTACTCCTGTGTGGGTGTATTCCAGCACGGCAAAGTTG 7090865
Query 450978 AAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTACGGATT 451037
| || || || |||||||| || || ||||| || |||| || || || ||
Sbjct 7090864 AGATCATTGCCAATGACCAGGGTAATCGCACTACCCCATCATATGTTGCCTTCACCGAGA 7090805
Query 451038 CAGAAAGACTTTTAGGGCAAGCTGCTAA--ATCAATGGTAAATTCAAATGCCAAAAACAC 451095
|||| | || | || | ||||| || |||| ||| || | | ||||||
Sbjct 7090804 CAGAGCGTCTGATCGGCGATGCTGCCAAGAATCA--GGTTGCCATGAACCCTACAAACAC 7090747
Query 451096 AGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAAAAAGA 451155
| | ||||| || ||||| |||||||||| | ||||||| || ||||||| ||
Sbjct 7090746 CATTTTCGATGCCAAGCGTTTGATTGGCCGTAAATTCGATGATGCTAATGTACAATCTGA 7090687
Query 451156 GAAAAA--ATT--CTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCAAG 451211
| || ||| | ||| || || || | | | || || || | || |
Sbjct 7090686 TATGAAGCATTGGCCATTC----GAAGTGGTTAGTGCTGATGGCAAACCAAAGATCAGTG 7090631
Query 451212 TAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTA 451271
| || |||| ||||| |||||||| || || || || ||||||||||| | |
Sbjct 7090630 TCTCCTACAAAGATGAAAAGAAAACTTTCTTCCCAGAGGAGATCTCATCTATGGTGTTGA 7090571
Query 451272 CTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTA 451331
|||| ||||| ||||| || ||| || | || | ||||| | || || || |
Sbjct 7090570 CTAAGATGAAGGAAACCGCTGAAGCCTACTTGGGCAAGACTGTTACCAACGCCGTCATCA 7090511
Query 451332 CTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTG 451391
|||| ||||| || ||||| ||| | ||||| ||||| || || ||||| || ||||
Sbjct 7090510 CTGTACCCGCATACTTCAACGATTCTCAACGTCAAGCTACCAAGGATGCCGGTACCATTG 7090451
Query 451392 CTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGAC 451451
||||||||||||| | || |||||||| || ||||| || |||||| | || || ||
Sbjct 7090450 CTGGTTTAAATGTATTGCGTATTATTAACGAGCCTACCGCTGCTGCTATTGCGTACGG-T 7090392
Query 451452 TAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAA 451511
| ||| || |||| | ||| ||| | || | || ||||| ||||| || |
Sbjct 7090391 TTGGACAA--GAAAGCTGTTGGTGAACGCAATGTATTGATCTTCGATTTGGGTGGTGGTA 7090334
Query 451512 CTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATG 451571
|| |||| || | || ||||| || ||||| | ||||| || ||| ||||| ||
Sbjct 7090333 CTTTTGATGTGTCCATTCTATCAATCGATGATGGTATCTTTGAGGTCAAGTCAACCGCTG 7090274
Query 451572 GTGATACTCATCTAGGAGGTGAAGATATTGATAAT 451606
|||| ||||| | || ||||||||| | || |||
Sbjct 7090273 GTGACACTCACTTGGGTGGTGAAGATTTCGACAAT 7090239
Score = 109 bits (120), Expect = 2e-18
Identities = 319/487 (66%), Gaps = 6/487 (1%)
Strand=Plus/Minus
Query 451991 AATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCA 452050
||||| ||||||||||| || || |||||||| || ||||| ||||| || || | | |
Sbjct 7089854 AATCCCGATGAAGCTGTAGCTTACGGTGCTGCCGTCCAAGCTGCTAT-CTTGCATGGTGA 7089796
Query 452051 GATGATGAAA-AATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGT 452109
| | | | || || ||| | || | | ||||| || || || || | || |
Sbjct 7089795 TAAGTCGCAGGAAGTACAAGACTTGTTGCTTCTCGATGTTACTCCCCTGTCATTGGGTAT 7089736
Query 452110 TGAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGAACTTCTATTCCTTGTAA 452169
|||||| ||||| || |||||| | || || || || || | ||||| ||
Sbjct 7089735 TGAAACCGCTGGCGGCGTGATGAGTGTCTTGATCAAGCGTAACACAACCATTCCAACCAA 7089676
Query 452170 AAAGAGTCAAACATTTAGTACAGCAAGT--GATAACCAACCAGGTGTAACTATTCAAGTG 452227
||| ||| ||||| | ||| | | | ||||| ||||| |||||| ||||||||
Sbjct 7089675 GCAGACTCAGACATTCACTAC--CTACTCAGATAATCAACCTGGTGTATTGATTCAAGTA 7089618
Query 452228 TTTGAAGGAGAACGTGCAATGACACGAGATAATAATAAACTAGGAGAATTTACTCTTTCA 452287
| |||||| |||||||||||||| || || ||| || ||| |||| | ||
Sbjct 7089617 TATGAAGGTGAACGTGCAATGACCAAGGACAACAATCTGCTTGGAAAATTCGAGTTGTCT 7089558
Query 452288 AACATTCCTCCTATGCCAAGGGGAACTCCTCAAATTGAAATTACCTATGATGTTGATGCA 452347
||||| || ||| | || |||||||||||| | |||| || |||||||
Sbjct 7089557 GGTATTCCACCAGCACCACGTGGTGTACCTCAAATTGAAGTAACCTTCGACATTGATGCC 7089498
Query 452348 AATGGTATTCTTAATGTGAGTGCAGTTGAAAAATCATCTGGAAAATCAGAAAAAATTACA 452407
|| ||||| | || || | || | ||| || | || | | || |||||
Sbjct 7089497 AACGGTATCTTGAACGTAACCGCTTTGGAACGTTCCACCAACAAGGAAAACAAGATTACC 7089438
Query 452408 ATTACTAATGATAAAAACCGTTTATCTAAAGAAGATATTGAAAAAATGGTAGATGAAGCA 452467
|| ||||| || || ||| |||| || ||||| || ||| ||||| | |||||
Sbjct 7089437 ATCACTAACGACAAGGGTCGTCTATCGAAGGAAGACATCGAACGTATGGTCAACGAAGCC 7089378
Query 452468 GAAAAAT 452474
|| ||||
Sbjct 7089377 GAGAAAT 7089371
>seq145
Length=1338480
Score = 167 bits (184), Expect = 9e-36
Identities = 163/210 (78%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108
|||| | |||||||| ||||| || || ||||| || || |||||||| || ||| | ||
Sbjct 899038 AATGCAAATTTTCGTGAAAACCCTCACGGGTAAGACCATCACTCTTGAGGTCGAACCCTC 898979
Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168
|||| || || | |||| ||||||||||||||| ||||| ||||| || |||||
Sbjct 898978 GGATACTATCGAGCATGTTAAGGCAAAAATTCAAGATAAAGAAGGTATTCCCCCCGATCA 898919
Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228
|||||||||||||||| | || |||||||| |||||||| | ||||| || || |||||
Sbjct 898918 ACAACGTTTAATTTTCGCGGGAAAACAACTGGAAGATGGTCGTACTTTAGCTGACTATAA 898859
Query 391229 TATTGATAAGGATGCAACACTTCACTTAGT 391258
||| | ||||| | || | ||||||||
Sbjct 898858 TATCCAAAAGGAGTCTACCTTACACTTAGT 898829
>seq1475
Length=10956678
Score = 161 bits (178), Expect = 4e-34
Identities = 257/366 (70%), Gaps = 6/366 (2%)
Strand=Plus/Minus
Query 451238 TTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAA 451297
||||| || |||||||| || |||||||| | ||||||||| ||||| || ||
Sbjct 1965695 TTTGCACCAGAAGAAATATCTGCTATGGTTTTGGGTAAAATGAAGGAAACGGCCGAGGCC 1965636
Query 451298 TATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCA 451357
||| |||| ||||| | || ||| |||| ||||| |||||||||||||||||
Sbjct 1965635 TATCTTGGCAAGAAGGTTACACACGCTGTAGTTACAGTTCCAGCTTATTTCAATGATGCT 1965576
Query 451358 CAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATT 451417
||||| || || || |||||||| || ||||| ||| | || ||| | || |||||
Sbjct 1965575 CAACGTCAGGCTACCAAAGATGCTGGCGTCATTGCCGGTCTGAACGTTATGCGTATTATC 1965516
Query 451418 AATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaa 451477
||||||||||| || |||||| | || || || | ||| || || || || |||
Sbjct 1965515 AATGAACCTACTGCTGCTGCTATTGCCTACGG-TTTGGATAA--GAAGGA---AGGCGAA 1965462
Query 451478 aaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATT 451537
|| || | || || || ||||| || || || ||| |||| || | | | ||
Sbjct 1965461 AAGAACGTGTTGGTGTTCGATTTGGGCGGTGGTACTTTTGATGTCTCGTTGTTGACCATC 1965402
Query 451538 GAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGAT 451597
|| |||| || || || || | | ||||||||||||||||| | || |||||||||
Sbjct 1965401 GATAATGGTGTTTTCGAGGTTATTTCTACCAATGGTGATACTCACTTGGGTGGTGAAGAT 1965342
Query 451598 ATTGAT 451603
| |||
Sbjct 1965341 TTCGAT 1965336
>seq1310
Length=3030561
Score = 154 bits (170), Expect = 6e-32
Identities = 162/213 (76%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108
|||| | ||||| || ||||||||||||||||| || || ||| | || || || ||||
Sbjct 644980 AATGCAGATTTTTGTCAAAACACTGACTGGTAAGACCATCACTTTGGAGGTCGAGCCATC 645039
Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168
||| | ||| ||| | | ||| ||||| ||||| || ||||| || || || |||||
Sbjct 645040 TGACACCATCGAAAATGTCAAAGCCAAAATCCAAGACAAAGAAGGTATCCCACCAGATCA 645099
Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228
||||||||| || ||| | || |||||| | |||||||| | |||||| | ||||| ||
Sbjct 645100 ACAACGTTTGATCTTCGCCGGCAAACAATTGGAAGATGGTCGCACTTTGTCCGATTACAA 645159
Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATT 391261
||| | ||||| |||| |||||||| || ||
Sbjct 645160 TATCCAAAAGGAGTCAACCCTTCACTTGGTGTT 645192
>seq924
Length=13938904
Score = 138 bits (152), Expect = 4e-27
Identities = 337/508 (66%), Gaps = 11/508 (2%)
Strand=Plus/Minus
Query 451103 GATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAAAAAGAGA--AAA 451160
||||| |||||| | |||||||| | || ||||||| || || || | || | |||
Sbjct 3301734 GATGCGAAACGTCTGATTGGCCGCAAGTTCGATGATGCCACAGTGCAGAGCGACATGAAA 3301675
Query 451161 AATT--CTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCAAGTAAATTA 451218
||| | ||| || || | ||| | || || ||||| | || | | | ||
Sbjct 3301674 CATTGGCCATTC----GAGGTCTTCAATGATAATGGCAAGCCGAAAATGCGTATTGAATA 3301619
Query 451219 TAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAAT 451278
||| ||||| | || | || ||| || || || || || ||||| | || || ||
Sbjct 3301618 TAAGGGTGAGAAGAAGAGCTTCTTTCCGGAGGAGATCTCTTCGATGGTATTGACAAAGAT 3301559
Query 451279 GAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCC 451338
||| ||||| || ||| || || || | ||||| ||||| || | ||||| ||
Sbjct 3301558 GAAGGAAACCGCCGAAGCTTACATGGGCAAGACTGTTACGGATGCTGTTGTCACTGTGCC 3301499
Query 451339 CGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTT 451398
|| |||||||| ||| ||||||| ||||| || || ||||| || |||||| ||| |
Sbjct 3301498 AGCCTATTTCAACGATTCACAACGTCAAGCCACCAAGGATGCGGGCGCTATTGCCGGTCT 3301439
Query 451399 AAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAA 451458
||||| || || || ||||||||||| || || || || | || ||||| || | ||
Sbjct 3301438 GAATGTGCTACGTATCATTAATGAACCCACCGCTGCAGCCATTGCTTATGGTCTCGACAA 3301379
Query 451459 ATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGA 451518
|| | || ||| ||| | || | || ||||| ||||| || ||| ||
Sbjct 3301378 ---GAAGGGCACTAGTGAACGTAATGTATTGATTTTCGATTTGGGTGGCGGCACTTTCGA 3301322
Query 451519 TACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATAC 451578
| || |||| | ||||| ||||| | ||||| || ||| | || || |||||
Sbjct 3301321 TGTGTCCATACTCACCATTGAGGATGGCATCTTTGAGGTTAAGTCCACGGCGGGCGATAC 3301262
Query 451579 TCATCTAGGAGGTGAAGATATTGATAAT 451606
||| | || || |||||| | || |||
Sbjct 3301261 ACATTTGGGCGGCGAAGATTTCGACAAT 3301234
>seq454
Length=983520
Score = 134 bits (148), Expect = 5e-26
Identities = 157/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || |||||||| || |||| || ||||| || ||| | || || ||| ||||
Sbjct 254903 ATGCAAATCTTCGTTAAGACCTTGACCGGCAAAACCATCACTTTGGAGGTCGAACCATCA 254844
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| ||| || | | || || || |||||||||||||| ||||| || ||||||
Sbjct 254843 GATACCATCGAGAATGTCAAGGCCAAGATCCAAGATAAGGAAGGTATTCCCCCAGATCAA 254784
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|||||||| ||||| | || |||||||| ||||| ||| | |||||| | || || ||
Sbjct 254783 CAACGTTTGATTTTTGCCGGCAAACAACTGGAAGACGGACGCACTTTGTCTGACTACAAC 254724
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATT 391261
|| | ||||| | || ||||| || |||||
Sbjct 254723 ATCCAAAAGGAGTCTACCCTTCATTTGGTATT 254692
Score = 122 bits (134), Expect = 3e-22
Identities = 136/182 (75%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | |||||||||||||| |||| || ||||| || || | || ||||| |||||
Sbjct 254447 ATGCAAATTTTCGTTAAAACTTTGACCGGCAAAACCATCACCTTGGAAGTTGAGCCATCT 254388
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| |||||| | | || ||||| ||||| |||||||| ||||| || ||||||
Sbjct 254387 GATACCATTGAGAATGTGAAGGCTAAAATCCAAGACAAGGAAGGTATTCCCCCAGATCAA 254328
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|||||||| || || | || || || | ||||||||| | |||||| | || || ||
Sbjct 254327 CAACGTTTGATCTTTGCCGGCAAGCAGTTGGAAGATGGACGCACTTTGTCTGACTACAAC 254268
Query 391230 AT 391231
||
Sbjct 254267 AT 254266
Score = 113 bits (124), Expect = 2e-19
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || |||||||| || |||| || ||||| || ||| | || |||||| ||||
Sbjct 254675 ATGCAAATCTTCGTTAAGACCTTGACCGGCAAAACCATCACTTTGGAGGTTGAACCATCA 254616
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| ||| || | | || || || || || |||||||| |||||||| ||||||
Sbjct 254615 GATACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGTATTCCTCCAGATCAA 254556
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|||||||| || || | || || || || ||||||||| | || ||| | || || ||
Sbjct 254555 CAACGTTTGATCTTTGCCGGCAAGCAGCTAGAAGATGGACGCACCTTGTCCGACTACAAC 254496
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATT 391261
|| | ||||| | || || || || || ||
Sbjct 254495 ATCCAAAAGGAATCTACTCTCCATTTGGTCTT 254464
Score = 102 bits (112), Expect = 3e-16
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | ||||||||||| || |||| || || || || || | || || ||| ||||
Sbjct 253736 ATGCAAATTTTCGTTAAGACTTTGACGGGCAAGACCATCACCTTGGAAGTCGAACCATCA 253677
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| ||| || | | || || || ||||| |||||||| || ||||| ||||||
Sbjct 253676 GATACCATCGAGAATGTGAAGGCCAAGATCCAAGACAAGGAAGGTATCCCTCCAGATCAA 253617
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| ||||| |||||| | || || || || ||||||||| | || || | || || ||
Sbjct 253616 CAGCGTTTGATTTTCGCTGGTAAGCAGCTGGAAGATGGACGTACATTATCCGACTACAAC 253557
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258
|| | ||||| | || || || || ||
Sbjct 253556 ATCCAAAAGGAATCTACCCTCCATTTGGT 253528
>seq1609
Length=2343729
Score = 127 bits (140), Expect = 8e-24
Identities = 271/399 (68%), Gaps = 8/399 (2%)
Strand=Plus/Minus
Query 451220 AAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATG 451279
|| ||||||| ||| |||||| ||||| ||||| || ||||| | || || |||
Sbjct 2177448 AAGGGTGAAATGAAACGTTTTGCACCTGAGGAAATCAGTTCAATGGTATTGACGAAGATG 2177389
Query 451280 AAAGAAACAGCAGAACAATATATTGGTTCTCCAG-TTACTGATGCAGTAATTACTGTTCC 451338
|| | || ||| ||| |||| | | || |||| ||||| || |||||||| ||
Sbjct 2177388 CGTGAGATCGCCGAAGTCTAT-TTGGGTGGCAAGGTTACCGATGCCGTTATTACTGTGCC 2177330
Query 451339 CGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTT 451398
|| ||||||||||| ||||| ||||| || |||||||| || |||||||| |
Sbjct 2177329 GGCCTATTTCAATGACAGCCAACGTCAAGCCACCAAAGATGCCGGTTCCATTGCTGGCCT 2177270
Query 451399 AAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAA 451458
||||| || || ||||| |||||||| || || |||||| | || || || | ||| |
Sbjct 2177269 CAATGTGCTGCGTATTATAAATGAACCCACCGCTGCTGCTTTGGCCTACGG-TTTGGATA 2177211
Query 451459 ATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGA 451518
| | ||| | ||||| ||| | | | |||||||| || || || ||| |||
Sbjct 2177210 AGAATTTGAA--GGGTGAAAAGAATGTGCTGATTTTTGATTTGGGCGGTGGTACTTTTGA 2177153
Query 451519 TACTTCTGTACTTTCAATTGAAGATGG---GGTATTTGAAGTAAAGGCAACCAATGGTGA 451575
| || | | || ||||| || || | || || || || | || ||| ||
Sbjct 2177152 TGTGTCCATTTTGTCCATTGATGAGGGCTCACTGTTCGAGGTGAAATCGACAGCTGGCGA 2177093
Query 451576 TACTCATCTAGGAGGTGAAGATATTGATAATGCAATTGT 451614
||| ||| | || || |||||| |||||||| | ||||
Sbjct 2177092 TACACATTTGGGCGGCGAAGATTTTGATAATCGACTTGT 2177054
>seq1069
Length=4782749
Score = 116 bits (128), Expect = 1e-20
Identities = 254/388 (65%), Gaps = 47/388 (12%)
Strand=Plus/Plus
Query 451274 AAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACT 451333
|||||||||||||| ||||| |||| || | | || |||| |||| || | ||
Sbjct 966298 AAAATGAAAGAAACCGCAGAGGCATATCTTAATACACCGGTTAAGAATGCTGTTGTCACA 966357
Query 451334 GTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCT 451393
|| || ||||||||||| || | || || || || || |||||||| || || || ||
Sbjct 966358 GTGCCGGCTTATTTCAACGACTCGCAGCGTCAGGCCACCAAAGATGCTGGTCAAATAGCC 966417
Query 451394 GGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCAT-----ATG 451448
||||| || || | || ||||||||||||||||||| ||||| || || | |||
Sbjct 966418 GGTTTGAACGTGTTGCGTGTTATTAATGAACCTACAGCTGCTGCGCTGGCCTACGGCATG 966477
Query 451449 GACTAG---GAAAATCAAAAGAAACAGA--------AGaaa------------aaaaTAT 451485
||| || || || ||| | || | | ||||| | |||||
Sbjct 966478 GACAAGACAGATGATAAAATGTAATAAAATTTTCTTAGAAATATTCAATGATTATAATAT 966537
Query 451486 TTT-------------------AGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTG 451526
||| ||||| |||||| ||||| ||||| |||| |||
Sbjct 966538 TTTCGTATATTTTTAGTATTGCAGTATATGATTTAGGTGGTGGAACCTTCGATATTTCAA 966597
Query 451527 TACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAG 451586
| ||| |||| || | || || || ||||||||| | ||||| || ||||| || |
Sbjct 966598 TTCTTGAAATTCAAAAGGGAGTTTTCGAAGTAAAGTCTACCAACGGCGATACGTTGCTTG 966657
Query 451587 GAGGTGAAGATATTGATAATGCAATTGT 451614
| ||||||||| ||||||| | |||||
Sbjct 966658 GCGGTGAAGATTTTGATAACACTATTGT 966685
>seq1553
Length=1510826
Score = 109 bits (120), Expect = 2e-18
Identities = 164/233 (70%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 451217 TATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAA 451276
|| ||||| |||| ||| || || || |||||||| || ||||| | || ||
Sbjct 1502290 TACAAAGGAGAAAACAAACGATTCGCACCAGAAGAAATCAGTTCCATGGTGTTGACCAAG 1502231
Query 451277 ATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTT 451336
||||| || || ||||| ||| | || | |||| || || || || || || ||
Sbjct 1502230 ATGAAGGAGACCGCAGAGGCTTATCTGGGCACAACAGTAACAGACGCGGTCATCACAGTG 1502171
Query 451337 CCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGT 451396
|| || ||||||||||| |||| || || || || || ||||| || | |||||||||
Sbjct 1502170 CCTGCATATTTCAATGACTCACAGCGACAGGCGACAAAGGATGCTGGTCGAATTGCTGGT 1502111
Query 451397 TTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGG 451449
|| ||||| | ||||| || || ||||| || || || ||| |||| || ||
Sbjct 1502110 TTGAATGTGTTACGAATCATCAACGAACCCACTGCCGCCGCTTTAGCTTACGG 1502058
Score = 105 bits (116), Expect = 3e-17
Identities = 163/233 (70%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 451217 TATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAA 451276
|| ||||| |||| ||| || || || |||||||| || ||||| | || ||
Sbjct 1493255 TACAAAGGAGAAAACAAACGATTCGCACCAGAAGAAATCAGTTCCATGGTGTTGACCAAG 1493196
Query 451277 ATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTT 451336
||||| || || ||||| ||| | || | |||| || || || || || || ||
Sbjct 1493195 ATGAAGGAGACCGCAGAGGCTTATCTGGGCACAACAGTAACAGACGCGGTCATCACAGTG 1493136
Query 451337 CCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGT 451396
|| || |||||||| || |||| || || || || || ||||| || | |||||||||
Sbjct 1493135 CCTGCATATTTCAACGACTCACAGCGTCAGGCGACAAAGGATGCTGGTCGAATTGCTGGT 1493076
Query 451397 TTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGG 451449
|| ||||| | ||||| || || ||||| || || || ||| |||| || ||
Sbjct 1493075 TTGAATGTGTTACGAATCATCAACGAACCCACTGCCGCCGCTTTAGCTTACGG 1493023
>seq1762
Length=809008
Score = 105 bits (116), Expect = 3e-17
Identities = 299/464 (64%), Gaps = 0/464 (0%)
Strand=Plus/Plus
Query 501060 TTTGCTTTCTATTTAGAACCTCATCATGCGGATATATTTGATTTTTTGGAACTACGAAAA 501119
|||||| | || || || ||| || || ||||| ||||| |||||||| || |||
Sbjct 694108 TTTGCTATATACTTGGAGCCTTGGCACGCTGATATTTTTGAATTTTTGGATTTAAAGAAA 694167
Query 501120 AATACTGGTGCCGAATCAGAAAGAGCCCGTGATTTATTTTTAGCATTATGGGTTTCTGAC 501179
||||| || || | |||| | |||||||||| || || ||| | |||||
Sbjct 694168 AATACCGGAAAAGAGGAGCATCGAGCTAGAGATTTATTTTATGCTTTGTGGATACCTGAC 694227
Query 501180 TTATTTATGAATCAGGTTAAATTAAATAATGATTGGTATTTATTTTGTCCAGACAAAGCA 501239
||||||||||| | ||| || |||| | ||||||| ||| | |||||| | ||
Sbjct 694228 TTATTTATGAAGCGTGTTGAAGCAAATGAGGATTGGTCATTAATGTGTCCACATAAGTGT 694287
Query 501240 CCAGGATTAAATGATGTATATGGAGATGAATATGAAACTCTTTATTGGAAATATGTATCA 501299
|| |||||| | || || | || || |||| |||| | || ||||||| | |
Sbjct 694288 CCCGGATTACACGAAGTTTGGGGTGAAGAATTCGAAAAGTTATACACAAAATATGAACAA 694347
Query 501300 GAAGAAAAATNNNNNNNNNNNNNNAAAGCCCGGAAATTATGGGAAGCTATAATGACAGCA 501359
|||| | ||||||| | | ||| | || || | |
Sbjct 694348 GAAGGACGTGCTAATAAGAAAGTTAAAGCCCAAAGCCTTTGGTTTTCCATTATAGAATCG 694407
Query 501360 CAGTTTGAAACTGGTTCACCCtatatgttatataaagataatattaataaaaaatcaaac 501419
||| | || || || |||| |||||||||||||| ||| | ||||| ||| ||
Sbjct 694408 CAGGTGGAGACGGGCACACCGTATATGTTATATAAGGATGCTTGTAATAGAAAGAGTAAT 694467
Query 501420 cagaaaaatataggaataatTAGAAGTTCAAATTTATGTGCTGAAATTGTAGAATATTCA 501479
|| | ||||| || | ||||| | | |||||||| | |||||||| || ||||||
Sbjct 694468 CAACAGAATATTGGCACAATTAAATGCAGTAATTTATGCACAGAAATTGTTGAGTATTCA 694527
Query 501480 GATTCTACTGAAACAGCTGCTTGTAATTTAGCTTCAATTGCTCT 501523
| || || ||||| || |||||||| || ||||| ||
Sbjct 694528 GCACCTGACGAGGTAGCTGTATGCAATTTAGCATCGATTGCCCT 694571
>seq952
Length=408348
Score = 100 bits (110), Expect = 1e-15
Identities = 162/233 (70%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 451217 TATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAA 451276
|| ||||| |||| ||| || || || |||||||| || ||||| | || ||
Sbjct 377272 TACAAAGGAGAAAACAAACGATTCGCACCAGAAGAAATCAGTTCCATGGTGTTGACCAAG 377213
Query 451277 ATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTT 451336
||||| || || || || ||| | || | |||| || || || || || || ||
Sbjct 377212 ATGAAGGAGACCGCTGAGGCTTATCTGGGCACAACAGTAACAGACGCGGTCATCACAGTG 377153
Query 451337 CCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGT 451396
|| || ||||| ||||| |||| || || || || || ||||| || | |||||||||
Sbjct 377152 CCTGCATATTTTAATGACTCACAGCGACAGGCGACAAAGGATGCTGGTCGAATTGCTGGT 377093
Query 451397 TTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGG 451449
|| ||||| | ||||| || || ||||| || || || ||| |||| || ||
Sbjct 377092 TTGAATGTGTTGCGAATCATCAACGAACCCACTGCCGCCGCTTTAGCTTACGG 377040
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975672683111048
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |