Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratitis_20capitata_20[refseq_20GCF_5F000347755.2_202013-03-21] 1,806 sequences; 479,047,742 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq333 107 2e-18 >seq333 Length=5851039 Score = 107 bits (118), Expect = 2e-18 Identities = 118/157 (75%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 154948 ATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAAC 155007 |||| || ||||| ||| | |||||||| ||| | |||||||| || || || | Sbjct 5757351 ATGGCGGACAGGTGTATTTGGATGGAGCTAATATGAATGCACAAGTGGGTCTGTGCCGGC 5757292 Query 155008 CATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCAC 155067 | |||| ||||| ||||| | ||| |||| ||||||||||| |||||||| |||| Sbjct 5757291 CTGGTGATTATGGCAGCGATGTCTCCCATTTAAATTTACATAAAACTTTCTGTATACCAC 5757232 Query 155068 ATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104 | || ||||| ||||||||| | ||||| || ||||| Sbjct 5757231 ACGGCGGTGGTGGTCCTGGCATGGGTCCAATTGGTGT 5757195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579199724271040