Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratitis_20capitata_20[refseq_20GCF_5F000347755.2_202013-03-21]
1,806 sequences; 479,047,742 total letters
Query= NC_016924.1
Length=185139
Score E
Sequences producing significant alignments: (Bits) Value
seq925 257 2e-63
>seq925
Length=3171676
Score = 257 bits (284), Expect = 2e-63
Identities = 481/694 (69%), Gaps = 12/694 (2%)
Strand=Plus/Minus
Query 37010 ATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTATACCAATTAGTTTTAC 37069
||| || || ||||| || || | |||| || | | || ||||||||||| |||||
Sbjct 2021792 ATCGGCTACGAATTCAATATAATCCGACATGAGACTACAATTCATACCAATTAGGTTTAC 2021733
Query 37070 TGGAATTGCATCT-TGAAGAAATAGTTTTTCTATTATTACAGCATCTTTAACTATATTAA 37128
|| | ||| ||| | ||||| | || ||| ||| | || || || | || | ||
Sbjct 2021732 AGGTAATGCGTCTGTTAAGAATTC-TTGTTCAATTTTAACTGCTTCAGATATGATTTCAA 2021674
Query 37129 CAATAACTTCTTCAGTTGGGGGA-TATTTTAAATATTTAAACAATAAACATGCAAAATCA 37187
|||| ||| | | |||| | | | |||| || |||| ||||| || ||||||
Sbjct 2021673 TAATACGTTCC-CTGCTGGGTTTCTGTATCAAATGTTGGAACATCAAACACGCGAAATCA 2021615
Query 37188 CAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAA 37247
||||||||||| || || | ||||| ||||| || || ||||| || |||||||||
Sbjct 2021614 CAATGTAAACCCTCGTCACGTGAGATCAACTCATTGGAGAATGTTAAGCCCGGCATTAAA 2021555
Query 37248 CCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACT 37307
|| | ||| |||| |||||| |||| ||||||| || |||||| || ||||||||
Sbjct 2021554 CCACGTTTCTTAAGCCAAAAGATTGATGCAAAACTGCCGCTAAAGAATATGCCTTCAACA 2021495
Query 37308 GCTGCAAATGCTACAAGACGTGTACCGAAAGTTG--AACTATAATCAGAAATCCAttttt 37365
|| |||||||| | | |||| ||| || ||| ||| | | |||||||||
Sbjct 2021494 GCGGCAAATGCAATTATACGTTCACCAAAGTTTGCAGACTTTGA--AGAAATCCAAGCCA 2021437
Query 37366 ttGTCCAATCTGCCTTTAATTTAACA-CATTCAATTGTTTCAATTGCTTTTAAGAGAAAG 37424
| |||||| ||||| |||||| || | || || |||||||| || || | | ||
Sbjct 2021436 GCGCCCAATCAGCCTTACGCTTAACAGCAGGC-ATCGTCTCAATTGCATTGAACAAATAG 2021378
Query 37425 tttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGA 37484
| | ||| || | || | ||||| || ||||||| || ||||||||||| |||||
Sbjct 2021377 TCTCTTTGTTTGCCGTCCTTAATATATGTGTCAATTAATATGCTATACATTTCTGAGTGC 2021318
Query 37485 ATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCG 37544
| |||||| ||||| || |||||||| || ||||||| || || | || |||||| ||
Sbjct 2021317 ACATTTTCCATAGCGATTTGAAAACCGTAGAAACACCGCGCCTCCGTTACTTGAACTTCT 2021258
Query 37545 TTA-AAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGC 37603
| | |||| | || | || |||||||| || || ||||| || ||||| || ||
Sbjct 2021257 TGACTGAAACGTTCTA-CCAAATTTTCATTTACAATACCATCCGAGGCGGCAAAAAAGGC 2021199
Query 37604 AAGAACATATTTTATAAAATGTCTTTCATCATTTGATAATTTTTTCCAATCATTAATATC 37663
| || | | |||||||||||| | | | | | | |||||||| | |||
Sbjct 2021198 TAATACGTGCGAAACAAAATGTCTTTCGTTGTCAGTAAGTCGTGCCCAATCATCTAAATC 2021139
Query 37664 TTTTGATAAATCAACTTCATCAACGGTCCAAAAA 37697
|| |||||||| || || || ||||||||||||
Sbjct 2021138 CTTGGATAAATCTACCTCTTCCACGGTCCAAAAA 2021105
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 592303428448240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |