Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratitis_20capitata_20[refseq_20GCF_5F000347755.2_202013-03-21] 1,806 sequences; 479,047,742 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq1762 109 1e-18 >seq1762 Length=809008 Score = 109 bits (120), Expect = 1e-18 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 221999 GGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATC 222058 |||||||| | ||| | || || ||| || | || ||| || | ||| || ||| Sbjct 694277 GGACACATTAATGACCAATCCTCATTTGCTTCAACACGCTTCATAAATAAGTCAGGTATC 694218 Query 222059 CACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGA 222118 |||| || | ||| | |||||| | || |||||||| ||| | |||||| | | | Sbjct 694217 CACAAAGCATAAAATAAATCTCTAGCTCGATGCTCCTCTTTTCCGGTATTTTTCTTTAAA 694158 Query 222119 TCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGT 222178 |||||||| |||||||| ||||||||||| ||||||| || | || | ||| || ||| Sbjct 694157 TCCAAAAATTCAAAAATATCAGCGTGCCAAGGCTCCAAGTATATAGCAAAAGCTCCTGGT 694098 Query 222179 CGCTTGTTGCCACCCTGATCCAC 222201 || || |||||| |||||||| Sbjct 694097 CGTTTACCGCCACCTTGATCCAC 694075 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928823831328640