Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratitis_20capitata_20[refseq_20GCF_5F000347755.2_202013-03-21]
1,806 sequences; 479,047,742 total letters
Query= NC_019945.1
Length=132978
Score E
Sequences producing significant alignments: (Bits) Value
seq1310 95.1 1e-14
seq454 84.2 2e-11
>seq1310
Length=3030561
Score = 95.1 bits (104), Expect = 1e-14
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610
|||||||| || ||||| |||||| | || ||||| ||||| || || || ||
Sbjct 644978 AAAATGCAGATTTTTGTCAAAACACTGACTGGTAAGACCATCACTTTGGAGGTCGAGCCA 645037
Query 28611 TCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGAT 28670
|| || || | | || |||| |||||| |||||||| || | || ||||
Sbjct 645038 TCTGACACCATCGAAAATGTCAAAGCCAAAATCCAAGACAAAGAAGGTATCCCACCAGAT 645097
Query 28671 CAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 28730
||||| | | ||||| || |||||||||||||||||| | ||| || |||||||
Sbjct 645098 CAACAACGTTTGATCTTCGCCGGCAAACAATTGGAAGATGGTCGCACTTTGTCCGATTAC 645157
Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTATT 28765
|| || ||||| || || || || ||| |||| ||
Sbjct 645158 AATATCCAAAAGGAGTCAACCCTTCACTTGGTGTT 645192
>seq454
Length=983520
Score = 84.2 bits (92), Expect = 2e-11
Identities = 135/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
|||||||| || || ||||| || || || |||||||| ||| ||| || || ||
Sbjct 254447 ATGCAAATTTTCGTTAAAACTTTGACCGGCAAAACCATCACCTTGGAAGTTGAGCCATCT 254388
Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673
|| || | | || | ||| |||||| ||||| || || | ||| |||||||
Sbjct 254387 GATACCATTGAGAATGTGAAGGCTAAAATCCAAGACAAGGAAGGTATTCCCCCAGATCAA 254328
Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733
|| | | |||||||| ||||| || ||||||||| ||| || | || || |||
Sbjct 254327 CAACGTTTGATCTTTGCCGGCAAGCAGTTGGAAGATGGACGCACTTTGTCTGACTACAAC 254268
Query 28734 ATTCAAAAAGAATC 28747
|| |||||||||||
Sbjct 254267 ATCCAAAAAGAATC 254254
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425395436574474
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |