Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratitis_20capitata_20[refseq_20GCF_5F000347755.2_202013-03-21]
1,806 sequences; 479,047,742 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq1762 176 2e-39
>seq1762
Length=809008
Score = 176 bits (194), Expect = 2e-39
Identities = 330/484 (68%), Gaps = 6/484 (1%)
Strand=Plus/Minus
Query 25887 TATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTG 25946
||| |||||| | ||| |||||| ||||| ||||| || ||||||||| || |
Sbjct 694282 TATGTGGACACATTAATGACCAATCCTCATTTGCTTCAACACGCTTCATAAATAAGTCAG 694223
Query 25947 GAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTT 26006
| ||||||| ||||||||||||||||| |||| || ||||||||| ||| || |
Sbjct 694222 GTATCCACAAAGCATAAAATAAATCTCTAGCTCGATGCTCCTCTTTTCCGGTATTTTTCT 694163
Query 26007 TTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTAC 26066
||| ||| || || ||||||||||| | |||||| || || || || ||||||||| |
Sbjct 694162 TTAAATCCAAAAATTCAAAAATATCAGCGTGCCAAGGCTCCAAGTATATAGCAAAAGCTC 694103
Query 26067 CTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACA 26126
|| || ||| || ||||||||||| || || | ||| | ||||||||| |||||
Sbjct 694102 CTGGTCGTTTACCGCCACCTTGATCCACATAACGTGCTACGTTATTGAAAACACGCAACA 694043
Query 26127 TTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAA 26186
|||| || || ||| |||| || || |||| |||| | ||| | | | |
Sbjct 694042 TTGGTACCAAGCCATTTGATGTGCCATTCGTGCCCGCAATCGAAGTGCCTTTAGCGCGTA 693983
Query 26187 TATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACA---ATCTG 26243
|| ||| ||| | || || |||||||| |||| ||||| |||||| || ||
Sbjct 693982 TACAATGAACATTTAAGCCAATACCACCAGCAGATTTAGAAATCAATGCACATTGATGTG 693923
Query 26244 AAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAG 26303
|||| || || || | ||| || | ||| ||||| |||||| ||||
Sbjct 693922 CCGATGTA---AATATGCCATCAATGGAGTCGTCGACCATAGTTAATAGAAAACATGAAG 693866
Query 26304 ATAATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATATC 26363
||||||| | || | || | | | ||| | ||| |||| ||||| ||| | || |
Sbjct 693865 ATAATTGTGGCTGTTTGGTAGCGGCAGCAAAGAGTGTTGGTGAGGCATGTGTAAAGTAAC 693806
Query 26364 CTTC 26367
|||
Sbjct 693805 GTTC 693802
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253034430431450
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |