Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratitis_20capitata_20[refseq_20GCF_5F000347755.2_202013-03-21] 1,806 sequences; 479,047,742 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq333 113 5e-20 >seq333 Length=5851039 Score = 113 bits (124), Expect = 5e-20 Identities = 119/157 (76%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 |||||||| ||||| | ||||||||| ||||| || ||||| |||||||| || |||||| Sbjct 5757195 ACACCAATTGGACCCATGCCAGGACCACCACCGCCGTGTGGTATACAGAAAGTTTTATGT 5757254 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 ||||||| ||| | ||||| ||||| |||| || ||||| || |||||| Sbjct 5757255 AAATTTAAATGGGAGACATCGCTGCCATAATCACCAGGCCGGCACAGACCCACTTGTGCA 5757314 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCAT 138339 || | ||| || ||||| | ||| ||||| || |||| Sbjct 5757315 TTCATATTAGCTCCATCCAAATACACCTGTCCGCCAT 5757351 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578985329111120