Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratitis_20capitata_20[refseq_20GCF_5F000347755.2_202013-03-21]
1,806 sequences; 479,047,742 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq113 104 2e-17
seq278 95.1 1e-14
seq454 84.2 2e-11
>seq113
Length=1127188
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34204 GGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGATAA 34263
|| || ||||||| ||||| ||||| | ||| || || | || |||||| ||
Sbjct 712659 GGAGGATTTTTCAAAATGAACGTGTTCACCTTGTGATTGACTTTGAGGAGACCGTGAAAA 712600
Query 34264 CCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATGAGCTCAGTC 34323
||||| |||||||| | || | || | | || | || || ||| | | |||||
Sbjct 712599 CCGCAGGCTTTGCATGCTTGCGAAATTGTTTGATTCCTGGCCGAAACGGTTAAATCAGTT 712540
Query 34324 TCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGGTCC 34383
||||| || || ||||| |||||||| || | ||||| |||||||| || || || |||
Sbjct 712539 TCCGGATTATCGCATTCGGGACACAAGACGTATTTGCGTATGAAACCGTCCAGTAGATCC 712480
Query 34384 TGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTT 34430
|| || || || || || || || || |||||||||||||| ||
Sbjct 712479 TGCAATTTGCTGGCATCATGCGAACCATTTACGATGAATCGTTCATT 712433
>seq278
Length=1407429
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 103646 CCCGTACACCCCGAGTATGCAATAGAAGCTGCGCGTTTGCGCACTTTTACCGCGTGGCCG 103705
|||| | | ||||||||||| || ||||| |||||||| || | ||| || |||||
Sbjct 840278 CCCGAATATCCCGAGTATGCCATTGAAGCGGCGCGTTTACGTTCGTTTGAAGCTTGGCCA 840219
Query 103706 CGCGGTTTGAAGCAACATCCCGAGATACTTGCCGAAGCTGGTTTCTTTTACACCGGCAAA 103765
||| |||| |||| |||| || || || || ||||| | ||| || ||||| |
Sbjct 840218 CGCAACATGAAACAACGTCCCAAGGATCTGGCTGATGCTGGCTACTTCTATACCGGTATT 840159
Query 103766 AGCGACAAAGTCAAATGCTTTTACTGCAACGGCGGTCTGAACAATTGGGAGCAAGATGAC 103825
| || ||||| |||||| |||| | || || || ||||||| | |||||
Sbjct 840158 GGTGATCGTGTCAAGTGCTTTAGCTGCGGTTGTGGCCTCAAGGATTGGGATGATGATGAT 840099
Query 103826 GACCCGTGGCAACAACACGCGCTTTGGTTC 103855
|| |||||| | ||||| ||| | ||||||
Sbjct 840098 GAACCGTGGGAGCAACATGCGATGTGGTTC 840069
>seq454
Length=983520
Score = 84.2 bits (92), Expect = 2e-11
Identities = 135/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
|||||||| || || |||||||| |||||||||||||| ||| | ||| |||||
Sbjct 254447 ATGCAAATTTTCGTTAAAACTTTGACCGGCAAAACCATCACCTTGGAAGTTGAGCCATCT 254388
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
||||| | | | || || || || ||||| ||||| | ||| ||||||
Sbjct 254387 GATACCATTGAGAATGTGAAGGCTAAAATCCAAGACAAGGAAGGTATTCCCCCAGATCAA 254328
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
||| | | || | ||| || || ||| |||| |||| | || || | || ||||||
Sbjct 254327 CAACGTTTGATCTTTGCCGGCAAGCAGTTGGAAGATGGACGCACTTTGTCTGACTACAAC 254268
Query 110453 ATTCAAAAAGAATC 110466
|| |||||||||||
Sbjct 254267 ATCCAAAAAGAATC 254254
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412832513098358
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |