Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratitis_20capitata_20[refseq_20GCF_5F000347755.2_202013-03-21]
1,806 sequences; 479,047,742 total letters
Query= NC_024450.1
Length=204054
Score E
Sequences producing significant alignments: (Bits) Value
seq1 96.9 5e-15
seq1255 93.3 6e-14
seq1146 91.5 2e-13
seq925 89.7 7e-13
>seq1
Length=10144477
Score = 96.9 bits (106), Expect = 5e-15
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand=Plus/Minus
Query 11727 CAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 11785
||||||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||
Sbjct 7972763 CAGTCCTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 7972704
Query 11786 TTCCCCGACGAGGAG 11800
||||||| || ||||
Sbjct 7972703 TTCCCCGCCGGGGAG 7972689
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||||||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 6181302 TCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 6181361
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 6181362 CCCGTCGGGGAG 6181373
Score = 95.1 bits (104), Expect = 2e-14
Identities = 66/75 (88%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 8655 TATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 8714
|| |||||| |||||||||||||||||| |||| ||||| | |||||||||||||||| |
Sbjct 6195852 TAGTCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAA 6195911
Query 8715 TTCCCCGACGAGGAG 8729
||||||| || ||||
Sbjct 6195912 TTCCCCGTCGGGGAG 6195926
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 7972760 TCCTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 7972701
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 7972700 CCCGCCGGGGAG 7972689
Score = 95.1 bits (104), Expect = 2e-14
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand=Plus/Plus
Query 11728 AGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786
|||||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||
Sbjct 8103869 AGTCCTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGAT 8103928
Query 11787 TCCCCGACGAGGAG 11800
|||||| || ||||
Sbjct 8103929 TCCCCGCCGGGGAG 8103942
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 8103871 TCCTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 8103930
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 8103931 CCCGCCGGGGAG 8103942
Score = 91.5 bits (100), Expect = 2e-13
Identities = 67/77 (87%), Gaps = 1/77 (1%)
Strand=Plus/Plus
Query 11726 CCAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCG 11784
||| |||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||
Sbjct 1837788 CCAATCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCA 1837847
Query 11785 ATTCCCCGACGAGGAGG 11801
|||||||| || |||||
Sbjct 1837848 ATTCCCCGTCGGGGAGG 1837864
Score = 91.5 bits (100), Expect = 2e-13
Identities = 65/75 (87%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 1837792 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 1837851
Query 8718 CCCGACGAGGAGCAG 8732
|||| || |||| ||
Sbjct 1837852 CCCGTCGGGGAGGAG 1837866
Score = 91.5 bits (100), Expect = 2e-13
Identities = 66/75 (88%), Gaps = 1/75 (1%)
Strand=Plus/Plus
Query 11727 CAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 11785
||||||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| |
Sbjct 8023717 CAGTCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAA 8023776
Query 11786 TTCCCCGACGAGGAG 11800
||||||| || ||||
Sbjct 8023777 TTCCCCGTCGGGGAG 8023791
Score = 89.7 bits (98), Expect = 7e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 1836882 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 1836941
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 1836942 CCCGTCGGGGAG 1836953
Score = 89.7 bits (98), Expect = 7e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 1837451 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 1837392
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 1837391 CCCGTCGGGGAG 1837380
Score = 89.7 bits (98), Expect = 7e-13
Identities = 65/74 (88%), Gaps = 1/74 (1%)
Strand=Plus/Plus
Query 11728 AGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786
|||||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||
Sbjct 1839384 AGTCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAAT 1839443
Query 11787 TCCCCGACGAGGAG 11800
|||||| || ||||
Sbjct 1839444 TCCCCGTCGGGGAG 1839457
Score = 89.7 bits (98), Expect = 7e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 1839386 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 1839445
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 1839446 CCCGTCGGGGAG 1839457
Score = 89.7 bits (98), Expect = 7e-13
Identities = 69/81 (85%), Gaps = 1/81 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 6180004 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 6180063
Query 11789 CCCGACGAGGAGGGAGGTTAA 11809
|||| || |||| || || ||
Sbjct 6180064 CCCGTCGGGGAGAGAAGTAAA 6180084
Score = 89.7 bits (98), Expect = 7e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 6180004 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 6180063
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 6180064 CCCGTCGGGGAG 6180075
Score = 89.7 bits (98), Expect = 7e-13
Identities = 65/74 (88%), Gaps = 1/74 (1%)
Strand=Plus/Plus
Query 11728 AGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786
|||||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||
Sbjct 6195853 AGTCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAAT 6195912
Query 11787 TCCCCGACGAGGAG 11800
|||||| || ||||
Sbjct 6195913 TCCCCGTCGGGGAG 6195926
Score = 89.7 bits (98), Expect = 7e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 6199662 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 6199721
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 6199722 CCCGTCGGGGAG 6199733
Score = 89.7 bits (98), Expect = 7e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 7959880 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 7959939
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 7959940 CCCGTCGGGGAG 7959951
Score = 89.7 bits (98), Expect = 7e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 8023720 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 8023779
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 8023780 CCCGTCGGGGAG 8023791
Score = 89.7 bits (98), Expect = 7e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 8502099 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 8502158
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 8502159 CCCGTCGGGGAG 8502170
Score = 89.7 bits (98), Expect = 7e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 8511927 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 8511986
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 8511987 CCCGTCGGGGAG 8511998
Score = 87.8 bits (96), Expect = 2e-12
Identities = 64/73 (88%), Gaps = 1/73 (1%)
Strand=Plus/Plus
Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787
||||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| |||
Sbjct 6181301 GTCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATT 6181360
Query 11788 CCCCGACGAGGAG 11800
||||| || ||||
Sbjct 6181361 CCCCGTCGGGGAG 6181373
Score = 87.8 bits (96), Expect = 2e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411
||||| || |||||| | |||||||||||||||| | |||| |||||||| ||||||||
Sbjct 6181374 ACTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACT 6181315
Query 139412 ATACTAACGAGGA 139424
|||||| ||||||
Sbjct 6181314 ATACTATCGAGGA 6181302
Score = 87.8 bits (96), Expect = 2e-12
Identities = 64/73 (88%), Gaps = 1/73 (1%)
Strand=Plus/Plus
Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787
||||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| |||
Sbjct 7959879 GTCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATT 7959938
Query 11788 CCCCGACGAGGAG 11800
||||| || ||||
Sbjct 7959939 CCCCGTCGGGGAG 7959951
Score = 87.8 bits (96), Expect = 2e-12
Identities = 65/76 (86%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411
||||| || |||||| |||||||||||||||||| | |||| |||||||| | ||||||
Sbjct 8103943 ACTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 8103884
Query 139412 ATACTAACGAGGATTT 139427
|||||| |||||| ||
Sbjct 8103883 ATACTACCGAGGACTT 8103868
Score = 87.8 bits (96), Expect = 2e-12
Identities = 64/73 (88%), Gaps = 1/73 (1%)
Strand=Plus/Plus
Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787
||||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| |||
Sbjct 8502098 GTCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATT 8502157
Query 11788 CCCCGACGAGGAG 11800
||||| || ||||
Sbjct 8502158 CCCCGTCGGGGAG 8502170
Score = 87.8 bits (96), Expect = 2e-12
Identities = 64/73 (88%), Gaps = 1/73 (1%)
Strand=Plus/Plus
Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787
||||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| |||
Sbjct 8511926 GTCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATT 8511985
Query 11788 CCCCGACGAGGAG 11800
||||| || ||||
Sbjct 8511986 CCCCGTCGGGGAG 8511998
Score = 86.0 bits (94), Expect = 8e-12
Identities = 65/77 (84%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| | |||||||||||||||| | |||| |||||||| | |||||||
Sbjct 1836953 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 1836894
Query 139413 TACTAACGAGGATTTTG 139429
||||| ||||||| |||
Sbjct 1836893 TACTATCGAGGATATTG 1836877
Score = 86.0 bits (94), Expect = 8e-12
Identities = 63/72 (88%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 1836882 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 1836941
Query 11789 CCCGACGAGGAG 11800
|||| || ||||
Sbjct 1836942 CCCGTCGGGGAG 1836953
Score = 86.0 bits (94), Expect = 8e-12
Identities = 63/72 (88%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 1837451 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 1837392
Query 11789 CCCGACGAGGAG 11800
|||| || ||||
Sbjct 1837391 CCCGTCGGGGAG 1837380
Score = 86.0 bits (94), Expect = 8e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| | |||||||||||||||| | |||| |||||||| |||||||||
Sbjct 6195926 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 6195867
Query 139413 TACTAACGAGGA 139424
||||| ||||||
Sbjct 6195866 TACTATCGAGGA 6195855
Score = 86.0 bits (94), Expect = 8e-12
Identities = 63/72 (88%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 6199662 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 6199721
Query 11789 CCCGACGAGGAG 11800
|||| || ||||
Sbjct 6199722 CCCGTCGGGGAG 6199733
Score = 86.0 bits (94), Expect = 8e-12
Identities = 67/80 (84%), Gaps = 0/80 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| | |||||||||||||||| | |||| |||||||| | |||||||
Sbjct 7959951 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 7959892
Query 139413 TACTAACGAGGATTTTGGTA 139432
||||| |||||| ||||||
Sbjct 7959891 TACTATCGAGGACGTTGGTA 7959872
Score = 86.0 bits (94), Expect = 8e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 7972689 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 7972748
Query 139413 TACTAACGAGGA 139424
||||| ||||||
Sbjct 7972749 TACTACCGAGGA 7972760
Score = 84.2 bits (92), Expect = 3e-11
Identities = 66/79 (84%), Gaps = 0/79 (0%)
Strand=Plus/Plus
Query 139350 CAACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCA 139409
|| |||| || |||||| | |||||||||||||||| | |||| |||||||| | ||||
Sbjct 1837377 CATCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCA 1837436
Query 139410 CTATACTAACGAGGATTTT 139428
|||||||| ||||||| ||
Sbjct 1837437 CTATACTATCGAGGATATT 1837455
Score = 84.2 bits (92), Expect = 3e-11
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| | |||||||||||||||| | |||| |||||||| | |||||||
Sbjct 1837863 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 1837804
Query 139413 TACTAACGAGGATT 139426
||||| ||||||||
Sbjct 1837803 TACTATCGAGGATT 1837790
Score = 84.2 bits (92), Expect = 3e-11
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| | |||||||||||||||| | |||| |||||||| | |||||||
Sbjct 6180075 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 6180016
Query 139413 TACTAACGAGGATTTT 139428
||||| ||||||| ||
Sbjct 6180015 TACTATCGAGGATGTT 6180000
Score = 84.2 bits (92), Expect = 3e-11
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| | |||||||||||||||| | |||| |||||||| | |||||||
Sbjct 6199733 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 6199674
Query 139413 TACTAACGAGGATTTT 139428
||||| ||||||| ||
Sbjct 6199673 TACTATCGAGGATGTT 6199658
Score = 84.2 bits (92), Expect = 3e-11
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 139351 AACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCAC 139410
|||||| || |||||| | |||||||||||||||| | |||| |||||||| | |||||
Sbjct 8502172 AACTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCAC 8502113
Query 139411 TATACTAACGAGGA 139424
||||||| ||||||
Sbjct 8502112 TATACTATCGAGGA 8502099
Score = 82.4 bits (90), Expect = 1e-10
Identities = 63/75 (84%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| | |||||||||||||||| | |||| |||||||| | |||||||
Sbjct 1839457 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 1839398
Query 139413 TACTAACGAGGATTT 139427
||||| |||||| ||
Sbjct 1839397 TACTATCGAGGACTT 1839383
Score = 82.4 bits (90), Expect = 1e-10
Identities = 62/73 (85%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411
||||| || |||||| | |||||||||||||||| | |||| |||||||| | ||||||
Sbjct 8023792 ACTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 8023733
Query 139412 ATACTAACGAGGA 139424
|||||| ||||||
Sbjct 8023732 ATACTATCGAGGA 8023720
Score = 82.4 bits (90), Expect = 1e-10
Identities = 62/73 (85%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411
||||| || |||||| | |||||||||||||||| | |||| |||||||| | ||||||
Sbjct 8511999 ACTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 8511940
Query 139412 ATACTAACGAGGA 139424
|||||| ||||||
Sbjct 8511939 ATACTATCGAGGA 8511927
>seq1255
Length=13665606
Score = 93.3 bits (102), Expect = 6e-14
Identities = 67/76 (88%), Gaps = 1/76 (1%)
Strand=Plus/Plus
Query 11727 CAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 11785
||||||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| |
Sbjct 1694690 CAGTCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAA 1694749
Query 11786 TTCCCCGACGAGGAGG 11801
||||||| || |||||
Sbjct 1694750 TTCCCCGTCGGGGAGG 1694765
Score = 91.5 bits (100), Expect = 2e-13
Identities = 66/75 (88%), Gaps = 1/75 (1%)
Strand=Plus/Minus
Query 11727 CAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 11785
||||||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| |
Sbjct 1695019 CAGTCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAA 1694960
Query 11786 TTCCCCGACGAGGAG 11800
||||||| || ||||
Sbjct 1694959 TTCCCCGTCGGGGAG 1694945
Score = 89.7 bits (98), Expect = 7e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 1694693 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 1694752
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 1694753 CCCGTCGGGGAG 1694764
Score = 89.7 bits (98), Expect = 7e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 1695016 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 1694957
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 1694956 CCCGTCGGGGAG 1694945
Score = 89.7 bits (98), Expect = 7e-13
Identities = 68/79 (86%), Gaps = 1/79 (1%)
Strand=Plus/Minus
Query 11726 CCAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCG 11784
||| |||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||
Sbjct 1696419 CCAATCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCA 1696360
Query 11785 ATTCCCCGACGAGGAGGGA 11803
|||||||| || |||| ||
Sbjct 1696359 ATTCCCCGTCGGGGAGTGA 1696341
Score = 89.7 bits (98), Expect = 7e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 1696415 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 1696356
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 1696355 CCCGTCGGGGAG 1696344
Score = 86.0 bits (94), Expect = 8e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411
||||| || |||||| | |||||||||||||||| | |||| |||||||| | ||||||
Sbjct 1696343 ACTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 1696402
Query 139412 ATACTAACGAGGATT 139426
|||||| ||||||||
Sbjct 1696403 ATACTATCGAGGATT 1696417
>seq1146
Length=4288032
Score = 91.5 bits (100), Expect = 2e-13
Identities = 66/75 (88%), Gaps = 1/75 (1%)
Strand=Plus/Minus
Query 11727 CAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 11785
||||||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| |
Sbjct 3299630 CAGTCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAA 3299571
Query 11786 TTCCCCGACGAGGAG 11800
||||||| || ||||
Sbjct 3299570 TTCCCCGTCGGGGAG 3299556
Score = 89.7 bits (98), Expect = 7e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 3167527 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 3167586
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 3167587 CCCGTCGGGGAG 3167598
Score = 89.7 bits (98), Expect = 7e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 3169663 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 3169722
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 3169723 CCCGTCGGGGAG 3169734
Score = 89.7 bits (98), Expect = 7e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 3299627 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 3299568
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 3299567 CCCGTCGGGGAG 3299556
Score = 89.7 bits (98), Expect = 7e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 3302107 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 3302048
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 3302047 CCCGTCGGGGAG 3302036
Score = 87.8 bits (96), Expect = 2e-12
Identities = 64/73 (88%), Gaps = 1/73 (1%)
Strand=Plus/Plus
Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787
||||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| |||
Sbjct 3167526 GTCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATT 3167585
Query 11788 CCCCGACGAGGAG 11800
||||| || ||||
Sbjct 3167586 CCCCGTCGGGGAG 3167598
Score = 87.8 bits (96), Expect = 2e-12
Identities = 64/73 (88%), Gaps = 1/73 (1%)
Strand=Plus/Minus
Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787
||||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| |||
Sbjct 3302108 GTCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATT 3302049
Query 11788 CCCCGACGAGGAG 11800
||||| || ||||
Sbjct 3302048 CCCCGTCGGGGAG 3302036
Score = 86.0 bits (94), Expect = 8e-12
Identities = 65/77 (84%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| | |||||||||||||||| | |||| |||||||| | |||||||
Sbjct 3169734 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 3169675
Query 139413 TACTAACGAGGATTTTG 139429
||||| ||||||| |||
Sbjct 3169674 TACTATCGAGGATGTTG 3169658
Score = 86.0 bits (94), Expect = 8e-12
Identities = 63/72 (88%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 3169663 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 3169722
Query 11789 CCCGACGAGGAG 11800
|||| || ||||
Sbjct 3169723 CCCGTCGGGGAG 3169734
Score = 84.2 bits (92), Expect = 3e-11
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGTAGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCC 11789
|||||| |||||||||| ||||| |||| ||||| | |||||||||||||||| |||||
Sbjct 3170184 TCCTCGATAGTATAGTGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCC 3170243
Query 11790 CCGACGAGGAGGGA 11803
||| || |||| ||
Sbjct 3170244 CCGTCGGGGAGAGA 3170257
Score = 82.4 bits (90), Expect = 1e-10
Identities = 62/72 (86%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||| | ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 3170184 TCCTCGATAGTATAGTG-TCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 3170242
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 3170243 CCCGTCGGGGAG 3170254
Score = 82.4 bits (90), Expect = 1e-10
Identities = 62/73 (85%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411
||||| || |||||| | |||||||||||||||| | |||| |||||||| | ||||||
Sbjct 3299555 ACTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 3299614
Query 139412 ATACTAACGAGGA 139424
|||||| ||||||
Sbjct 3299615 ATACTATCGAGGA 3299627
Score = 82.4 bits (90), Expect = 1e-10
Identities = 63/75 (84%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 139350 CAACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCA 139409
|| |||| || |||||| | |||||||||||||||| | |||| |||||||| | ||||
Sbjct 3302033 CATCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCA 3302092
Query 139410 CTATACTAACGAGGA 139424
|||||||| ||||||
Sbjct 3302093 CTATACTATCGAGGA 3302107
>seq925
Length=3171676
Score = 89.7 bits (98), Expect = 7e-13
Identities = 68/79 (86%), Gaps = 1/79 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 1579188 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 1579247
Query 11789 CCCGACGAGGAGGGAGGTT 11807
|||| || ||||| || ||
Sbjct 1579248 CCCGTCGGGGAGGAAGTTT 1579266
Score = 89.7 bits (98), Expect = 7e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 1579188 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 1579247
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 1579248 CCCGTCGGGGAG 1579259
Score = 86.0 bits (94), Expect = 8e-12
Identities = 65/77 (84%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| | |||||||||||||||| | |||| |||||||| | |||||||
Sbjct 1579259 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 1579200
Query 139413 TACTAACGAGGATTTTG 139429
||||| ||||||| |||
Sbjct 1579199 TACTATCGAGGATGTTG 1579183
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 652830062028640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |