Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratitis_20capitata_20[refseq_20GCF_5F000347755.2_202013-03-21] 1,806 sequences; 479,047,742 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq913 95.1 2e-14 >seq913 Length=5285483 Score = 95.1 bits (104), Expect = 2e-14 Identities = 198/295 (67%), Gaps = 14/295 (5%) Strand=Plus/Plus Query 161408 GCTAAACTCTATGGATATTGGATTGTAAAGAACTACAGAGAGAGTTATGGGATGCACGCC 161467 |||||| | ||||||| ||||||||| | ||||| | || ||| ||| ||||| Sbjct 2330467 GCTAAAATGTATGGATTTTGGATTGTTATCAACTATCGTGAAGCGTATAATATGTACGCC 2330526 Query 161468 AGTAGTGGTATTCTATTCAACCATGAGTCACCACGACGGGGTGAGACTTTCGTAACCCGT 161527 ||| |||||| || ||||| |||||||||||||| || || || | |||||| || || Sbjct 2330527 TGTAATGGTATACTTTTCAATCATGAGTCACCACGTCGTGGCGAAAATTTCGTGACTCGC 2330586 Query 161528 AAGATTACTAG-------GGGACTATCCCGTATTAGTACAGGACTACAGGATTGTCTATA 161580 || ||||| | | || ||| ||| | | || ||| | | | Sbjct 2330587 AAAATTACCCGTTCAGTTGCGAAAATC---TATCATCA----ACAGTTGGAATCCTTTGA 2330639 Query 161581 CCTAGGTAATCTAAACTCAAGACGAGATTGGGGTCATGCTGAAGACTATGTGGAGGCTAT 161640 |||| ||| | | || | ||| |||||||||||||| || |||||||| || || Sbjct 2330640 GTTAGGCAATTTGGATTCGAAACGTGATTGGGGTCATGCCATGGATTATGTGGAAGCCAT 2330699 Query 161641 GTGGTTGATGTTACAACAGGAAACTCCTGATGACTATGTGATTGCCACAGGTAAA 161695 |||| ||||||| ||| || | || || | ||| |||||||| ||| || Sbjct 2330700 GTGGATGATGTTGCAATGTGAGAAGCCGTCCGATTTTGTTATTGCCACCGGTGAA 2330754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729913121839280