Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratitis_20capitata_20[refseq_20GCF_5F000347755.2_202013-03-21] 1,806 sequences; 479,047,742 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq145 95.1 1e-14 >seq145 Length=1338480 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGT 117364 |||||||| ||||||| ||| ||| |||||| ||||| ||||| ||||||||||| Sbjct 25105 GTGAAAATATAACGAGCGCTCGCACAATCCTTTCCACCCTGTAGACGAGTACCGAATTGA 25046 Query 117365 CCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACA 117424 || | |||||||| | || | || || | || ||| ||||||| ||||| || ||| Sbjct 25045 CCGCGAGGCTCCAATAAATTAATATTATTTGAACCGACATAGTTTTGTGCCAAATTAACA 24986 Query 117425 ATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACGTAGCCC 117484 || ||| |||| || | || || || ||||| || | | ||||| || | || Sbjct 24985 ATGGTAGCTTGTAGCGACATTTCGCCGTGATGATAAGCAGACATTTCCGCAACAGAACCA 24926 Query 117485 GCCAGCTGAGCCACCTT 117501 | || ||| || || || Sbjct 24925 GACAACTGTGCGACTTT 24909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547203646598800