Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratitis_20capitata_20[refseq_20GCF_5F000347755.2_202013-03-21] 1,806 sequences; 479,047,742 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq1080 89.7 6e-13 >seq1080 Length=5474809 Score = 89.7 bits (98), Expect = 6e-13 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 32849 GATAAATTCTTTTATACATGTTATAATGTATAGTTATTACGGATTAACAGCAATAGGTCC 32908 |||||||||||| ||||| | || ||||| |||||||||||||||| || | ||||| Sbjct 2109162 GATAAATTCTTTCATACACATAATTATGTACAGTTATTACGGATTAAGTGCTCTGGGTCC 2109221 Query 32909 TTCCTTGCGAAAATATCTATGGTGGAAAAAATATTTAACTATCATACAATTG 32960 | | | | ||||| ||| |||||||| |||||| | || | | | |||||| Sbjct 2109222 TAACGTTCAAAAATTTCTCTGGTGGAAGAAATATCTCACGACCCTGCAATTG 2109273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603167183193440