Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratitis_20capitata_20[refseq_20GCF_5F000347755.2_202013-03-21]
1,806 sequences; 479,047,742 total letters
Query= NC_029255.1
Length=129563
Score E
Sequences producing significant alignments: (Bits) Value
seq969 84.2 2e-11
>seq969
Length=5813909
Score = 84.2 bits (92), Expect = 2e-11
Identities = 193/291 (66%), Gaps = 0/291 (0%)
Strand=Plus/Plus
Query 118374 AAAATCTTCAAACTTAAAGTCTTCTATATTTTTGATATCCTTGTTTATGGATAGTGTGGG 118433
||| || ||||| ||||||| || ||| ||||| || ||||| | | | ||
Sbjct 2585372 AAAGTCATCAAAAGTAAAGTCCTCGATAGATTTGAGTTCACGCTTTATAATCAATTTAGG 2585431
Query 118434 AAACGGGAGAGGCTCCCTTGTGAGTTGGAGTTTCAGTGGCTCAATGTGATTCATATAGAC 118493
|||||| |||| | | || | ||| | | || || ||||| || | | ||||
Sbjct 2585432 AAACGGACGAGGTTTACGGGTTATTTGTTCTGTTAGCGGTTCAATATGCGTTTTGTAGAT 2585491
Query 118494 ATGAGCATCCCCAATTGTATGTATGAATTCACCAGGTGTAAGCCCTGTCAGGTGAGCAAT 118553
|||||| || |||| ||||| | ||| ||||| || ||| || | || |||||
Sbjct 2585492 ATGAGCGTCTCCAAGAGTATGCACGAAGTCACCTGGACGAAGATTAGTTATATGTGCAAT 2585551
Query 118554 CATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGAACACCCAGACCCATGTCTGC 118613
|||||| || | ||| || || | || || || || |||| ||||| || ||
Sbjct 2585552 CATGTAGGTAAGTAAAGAATACGAAGCAATGTTGAACGGTACGCCCAATCCCATATCGGC 2585611
Query 118614 TGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCAACATAAAACTG 118664
| ||||||||||| || || ||||| ||||||||||| |||| ||
Sbjct 2585612 GCTACGTTGGTACAATTGACAGGACAGCTCTCCGTTTGCAACGAAAAATTG 2585662
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 414467677106584
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |