Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratitis_20capitata_20[refseq_20GCF_5F000347755.2_202013-03-21]
1,806 sequences; 479,047,742 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq1762 527 9e-145
seq925 275 9e-69
>seq1762
Length=809008
Score = 527 bits (584), Expect = 9e-145
Identities = 1235/1850 (67%), Gaps = 30/1850 (2%)
Strand=Plus/Minus
Query 76803 GCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAA 76862
|| || ||||| || | ||| ||||| || ||||||| ||| |||| || || |||
Sbjct 695450 GCTGGCTTTGTGCGCAAATAATACATGCCGGTTTTTAAACCTGCTTTCCAACCATAAAAA 695391
Query 76863 TGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTT 76922
|| || || |||||| ||| |||| || |||| || ||||| | || ||||||
Sbjct 695390 TGTATAGAAGTAAGTTTGCCGTAATTAGGTTCTGCTACGTGTATATTAAAGGATTGACTT 695331
Query 76923 TGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCC 76982
|| ||||| || || || | |||||| ||||||||||| || ||| | ||| |||
Sbjct 695330 TGGTCGATAAAGGCACCACGATCAGCAGCCATTTTTATGGAAGTTTTTACCGAAATCTCC 695271
Query 76983 CAAATAGTTTTGAAAACTTGTTTGA-TATCATCTGGA----AGGTTTG-TATTTTGAATG 77036
|||| ||||| | | ||| | ||| | ||| || || | ||||| ||
Sbjct 695270 CAAACGGTTTTATACA---GTTCGCGTATGTTTTGGGGTATAGATTCAATGTTTTGTATT 695214
Query 77037 GAACCACCATCTGATATAATTGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTT 77096
||||||| | |||||| ||| || |||||||||| ||| || | || ||
Sbjct 695213 GAACCACGGCTAGTGATAATTTGATTTTTCATATCATCATCCCATAAGCCCAATTCAGTA 695154
Query 77097 AAAACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTG 77156
| | | | | |||| | || || | ||||| || || || | || | |||||
Sbjct 695153 AGGTCACGCAACAAATGATGGTTTACAACCTGAAACTCACCGGAAAGCACACGGCGAGTA 695094
Query 77157 TAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAA 77216
|||||||| ||| || || || | ||||||||| || |||| ||||| || || |||
Sbjct 695093 TAAATATTGGAGGTGTACGGCTCAAAAGATTCATTATTACCCATTATTTGTGCCGTTGAA 695034
Query 77217 GCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCT 77276
|| |||||||| ||||| | | |||| || | | ||||||| | | ||||| |||
Sbjct 695033 GCGGTTGGCATGGGTGCAAGTAGTAAAGAGTTGCGTACACCATGTTTCTTAATTTTTTCT 694974
Query 77277 TTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGA 77336
|| | | |||||| ||| || || | || |||||| | ||| || |||| |
Sbjct 694973 TTCAACTCAGTCCAATTCCATAGTTCAGTCGGCTTTTTATCCCACATATCATACTGTAAA 694914
Query 77337 ATTCCGTTACTAGCATATGATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGT 77396
|| || || ||| | ||| || | ||| ||||| ||||| || | ||||||| | |
Sbjct 694913 ATACCTTTGCTAACCGGTGAACCTTCATAAGTTTCGTAAGGCCCAAATTTTTCAGCCAAT 694854
Query 77397 TCACAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCT 77456
|| || || ||||| || || || || ||||||||||| || || | | ||| |
Sbjct 694853 TCGCAGCTGGCTTCTAAAGCACCATAGTAAATTGTTTCAAATATTTGTTGATTCAATAGG 694794
Query 77457 TGTGCTTCAATACTATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGA 77516
||||| || || | ||||| | | || || || || |||||||| || ||
Sbjct 694793 AATGCTTGTTCGCTTTCGTAAGGATAGCGCATGAGGATTAATGCGTCTGCTAAACCTTGT 694734
Query 77517 ACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAA 77576
|| |||||||| || || | ||| || ||| || | || ||||| || | |||||
Sbjct 694733 ACACCAATACCGATCGGACGATGCCTGAAATTAGATTTCTTGGCTTCAGGCAATGGATAG 694674
Query 77577 TAATTAATGTCTATAATTTTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAG- 77635
| || || || || |||||||| | ||| | || ||| || ||||| ||
Sbjct 694673 TGGTTTATATCAATGATTTTATTTAAATTCCGCGTCACGGTCTTAGTGACTTCCTTGAGG 694614
Query 77636 --TTTAAGAAAATCAAATCTTCCATCTA---TAACAAACATGTTCAAAGCTATAGATGCT 77690
||||| |||| || || ||| |||||||||| || | || || ||||||
Sbjct 694613 CGTTTAA---AATCGTATTTTTTGTCTGGTGTAACAAACATATTGAGGGCAATCGATGCT 694557
Query 77691 AGATTACAAACTGCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTA 77750
| ||| || || |||||||| | || | ||| | | || || || |||| ||||
Sbjct 694556 AAATTGCATACAGCTACCTCGTCAGGTGCTGAATACTCAACAATTTCTGTGCATAAATTA 694497
Query 77751 CTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAA 77810
|| ||||| || ||||| | ||| ||||| || |||||| |||| || | ||||||||
Sbjct 694496 CTGCATTTAATTGTGCCAATATTCTGTTGATTACTCTTTCTATTACAAGCATCCTTATAT 694437
Query 77811 AGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTA 77870
| ||| |||| || || || || | ||| ||||| ||||| || ||| | | || |
Sbjct 694436 AACATATACGGTGTGCCCGTCTCCACCTGCGATTCTATAATGGAAAACCAAAGG-CTTTG 694378
Query 77871 GCTTTTATCATAGATTTGTATCGCCTCTCTCTT--TCATATTGAGTATATAGCCGTTCAA 77928
| |||| | | | | || | | || |||| ||||||| || |||| | ||| |
Sbjct 694377 GGCTTTAACTTTCTTAT-TAGCACGTCCTTCTTGTTCATATTTTGTGTATAACTTTTCGA 694319
Query 77929 ATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGT 77988
|||| || |||||||| || | ||||| || || | || ||| ||||| |||||||| |
Sbjct 694318 ATTCTTCACCCCAAACTTCGTGTAATCCGGGACACTTATGTGGACACATTAATGACCAAT 694259
Query 77989 CACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGAT 78048
| ||| | | | ||| || |||||||| | ||||||||||| | |||| ||||| ||
Sbjct 694258 CCTCATTTGCTTCAACACGCTTCATAAATAAGTCAGGTATCCACAAAGCATAAAATAAAT 694199
Query 78049 CTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATAT 78108
||| | || ||| || || ||||| ||||| || || | ||| | ||| || | |||||
Sbjct 694198 CTCTAGCTCGATGCTCCTCTTTTCCGGTATTTTTCTTTAAATCCAAAAATTCAAAAATAT 694139
Query 78109 CAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGAT 78168
||| ||||| || || | ||||| || | | |||| ||||||||| || || ||||
Sbjct 694138 CAGCGTGCCAAGGCTCCAAGTATATAGCAAAAGCTCCTGGTCGTTTACCGCCACCTTGAT 694079
Query 78169 CTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTC 78228
| | ||| | || |||||| |||| | ||||||||| | | || || ||||| |
Sbjct 694078 CCACATAACGTGCTACGTTATTGAAAACACGCAACATTGGTACCAAGCCATTTGATGTGC 694019
Query 78229 CATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTC 78288
|||| || || | ||| || | || | ||||| ||| | || || || || |
Sbjct 694018 CATTCGTGCCCGCAATCGAAGTGCCTTTAGCGCGTATACAATGAACATTTAAGCCAATAC 693959
Query 78289 CTCCTGCCATCTTAGATATTAGAGCGCA---ACGTTTCAATGTATCGTAGATACCCTCTA 78345
| || || ||||| || | || || | || | ||||| | || || || |
Sbjct 693958 CACCAGCAGATTTAGAAATCAATGCACATTGATGTGCCGATGTA---AATATGCCATCAA 693902
Query 78346 TACTGTCATCCATCAT-GTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCT 78404
| ||| || | ||| ||||| |||||||| ||| | ||| | || || |
Sbjct 693901 TGGAGTCGTCGACCATAGTTAA-TAGAAAACATGAAGATAATTGTGGCTGTTTGGTAGCG 693843
Query 78405 GCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTT 78464
||| ||| | ||| || || ||||| ||||| | ||| ||||| | |||||||||
Sbjct 693842 GCAGCAAAGAGTGTTGGTGAGGCATGTGTAAAGTAACGTTCTGAAAGCAAATTGTATGTG 693783
Query 78465 TCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGC 78524
|| || || | ||||| ||| ||| || || | ||||||||||| |||||||||
Sbjct 693782 TCGATTGCCGCATCTATATCCTCACCATGTATACCAATGGCTACACGCATTAACATATGC 693723
Query 78525 TGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTA 78584
|| || | |||||| | ||| ||| | || | || || || ||| | ||| |||
Sbjct 693722 TGTGGCCGTTCAACAATTTTACCATTCAACTTGAGTAAATAGGAACGTTCAAGAGTCTTA 693663
Query 78585 AAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAATAACAGAATT 78634
|| || ||||| || || || || | || |||||||| |||| ||
Sbjct 693662 AACCCGAAATAATTATAACCGAAATCACGATCATAAATAATTGCAGAGTT 693613
>seq925
Length=3171676
Score = 275 bits (304), Expect = 9e-69
Identities = 485/701 (69%), Gaps = 7/701 (1%)
Strand=Plus/Minus
Query 47975 ATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAAGTTTAAC 48034
||| || |||||||| ||||| ||| | ||||||||| || || || || ||
Sbjct 2021792 ATCGGCTACGAATTCAATATAATCCGACATGAGACTACAATTCATACCAATTAGGTTTAC 2021733
Query 48035 TGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTAT--CGAT 48092
|||| || || || | || |||||||| || | || || || ||| || | ||
Sbjct 2021732 AGGTAATGCGTCTGTTAAGAATTCTTGTTCAATTTTAACTGCTTCAGATATGATTTCAAT 2021673
Query 48093 GTTACCGTTTCCTCACTTGGTGGATACAACAAATGTTTAAACATTAAACATGCAAAATCA 48152
||| ||| ||| || ||| | | |||||||| ||||| ||||| || ||||||
Sbjct 2021672 AATAC-GTTCCCTG-CTGGGTTTCTGTATCAAATGTTGGAACATCAAACACGCGAAATCA 2021615
Query 48153 CAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGT 48212
||||| | ||| || || | || || || || || ||||| | || |||||||
Sbjct 2021614 CAATGTAAACCCTCGTCACGTGAGATCAACTCATTGGAGAATGTTAAGCCCGGCATTAAA 2021555
Query 48213 CCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACG 48272
|||||||| || |||||||| |||| || ||| || ||||||||||||||| ||
Sbjct 2021554 CCACGTTTCTTAAGCCAAAAGATTGATGCAAAACTGCCGCTAAAGAATATGCCTTCAACA 2021495
Query 48273 GCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTT-CGTTGTGTA--TCCACCGTTGT 48329
|| |||||||| | | | || || | | || | ||| | |||| |
Sbjct 2021494 GCGGCAAATGCAATTATACGTTCACCAAAGTTTGCAGACTTTGAAGAAATCCAAGCCAGC 2021435
Query 48330 GCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGttt 48389
|||||||||||||| ||| ||| |||||| || || || ||||| || | | ||| |
Sbjct 2021434 GCCCAATCAGCCTTACGCTTAACAGCAGGCATCGTCTCAATTGCATTGAACAAATAGTCT 2021375
Query 48390 ttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGAATA 48449
||| |||| || |||| || || || ||||| | ||||||||||| ||||| | |
Sbjct 2021374 CTTTGTTTGCCGTCCTTAATATATGTGTCAATTAATATGCTATACATTTCTGAGTGCACA 2021315
Query 48450 TTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGTA 48509
||||| || || || ||||| ||||| ||||| | ||| || || | || || || |
Sbjct 2021314 TTTTCCATAGCGATTTGAAAACCGTAGAAACACCGCGCCTCCGTTACTTGAACTTCTTGA 2021255
Query 48510 CAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAAT 48569
| || ||||| ||||||| |||||||| || ||||| || |||||||| ||||||
Sbjct 2021254 CTGAAACGTTCTACCAAATTTTCATTTACAATACCATCCGAGGCGGCAAAAAAGGCTAAT 2021195
Query 48570 ACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTGATATCTTTT 48629
|| || || ||||| | |||||||| ||| ||| ||| |||| | ||| ||
Sbjct 2021194 ACGTGCGAAACAAAATGTCTTTCGTTGTCAGTAAGTCGTGCCCAATCATCTAAATCCTTG 2021135
Query 48630 GATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGC 48670
|||| |||||| ||||| | |||||||| || || |||||
Sbjct 2021134 GATAAATCTACCTCTTCCACGGTCCAAAAAGACGCTTCTGC 2021094
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694653117851840
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