Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratitis_20capitata_20[refseq_20GCF_5F000347755.2_202013-03-21]
1,806 sequences; 479,047,742 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq925 246 3e-60
>seq925
Length=3171676
Score = 246 bits (272), Expect = 3e-60
Identities = 474/691 (69%), Gaps = 6/691 (1%)
Strand=Plus/Minus
Query 23343 ATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATTAGTTTTAC 23402
||| ||||| ||||||||||| | |||| | | | | || ||||| ||||| |||||
Sbjct 2021792 ATCGGCTACGAATTCAATATAATCCGACATGAGACTACAATTCATACCAATTAGGTTTAC 2021733
Query 23403 TGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATTTGAAC 23462
|| | || || ||||||| || |||||| ||| || || || |||| ||
Sbjct 2021732 AGGTAATGCGTCTGTTAAGAATTCTTGTTCAATTTTAACTGCTTCAGATATGATTTCAAT 2021673
Query 23463 AATAACTTCTTCACTAGGTGGATATTTTAAATACTTAAACAATAAACATGCAAAATCACA 23522
|||| ||| || ||| | | | |||| | |||| ||||| || ||||||||
Sbjct 2021672 AATACGTTCCCTGCTGGGTTTCTGTATCAAATGTTGGAACATCAAACACGCGAAATCACA 2021613
Query 23523 ATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCC 23582
||||| || || || | ||||| ||||| || |||||||| || |||||||| ||
Sbjct 2021612 ATGTAAACCCTCGTCACGTGAGATCAACTCATTGGAGAATGTTAAGCCCGGCATTAAACC 2021553
Query 23583 TCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGC 23642
||||| |||| |||||| |||| ||||| ||| |||||| || || ||||||||
Sbjct 2021552 ACGTTTCTTAAGCCAAAAGATTGATGCAAAACTGCCGCTAAAGAATATGCCTTCAACAGC 2021493
Query 23643 CGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttttGT 23702
||||| || | | |||| |||||| ||||| | ||||||||| |
Sbjct 2021492 GGCAAATGCAATTATACGTTCACCAAAGTTTGCAGACTTTGAAGAAATCCAAGCCAGCGC 2021433
Query 23703 CCAATTAGCCTTCAATTTTACA-CACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGT-T 23760
||||| |||||| || ||| || | || || |||||||| || || | || ||| |
Sbjct 2021432 CCAATCAGCCTTACGCTTAACAGCAGGC-ATCGTCTCAATTGCATTGAACA-AATAGTCT 2021375
Query 23761 TTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATA 23820
||| || || | |||||||| ||||||| || ||||||||||| || || | |
Sbjct 2021374 CTTTGTTTGCCGTCCTTAATATATGTGTCAATTAATATGCTATACATTTCTGAGTGCACA 2021315
Query 23821 TTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTA 23880
||||| ||||| || ||||| || || ||||| | || || | | |||||| || | |
Sbjct 2021314 TTTTCCATAGCGATTTGAAAACCGTAGAAACACCGCGCCTCCGTTACTTGAACTTCTTGA 2021255
Query 23881 AAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGA 23940
|| | || | |||||||| || ||||||||||| || ||||| || || |
Sbjct 2021254 CTGAAACGTTCTACCAAATTTTCATTTACAATACCATCCGAGGCGGCAAAAAAGGCTAAT 2021195
Query 23941 ACATATTTTATAAAATGTCTTTCATCAGTTGATAA-TTTTTTCCAATCATTAATATCTTT 23999
|| | | |||||||||||| | || ||| | | |||||||| | ||| ||
Sbjct 2021194 ACGTGCGAAACAAAATGTCTTTCGT-TGTCAGTAAGTCGTGCCCAATCATCTAAATCCTT 2021136
Query 24000 TGATAAATCAACTTCATCAACTGTCCAAAAA 24030
|||||||| || || || || |||||||||
Sbjct 2021135 GGATAAATCTACCTCTTCCACGGTCCAAAAA 2021105
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521476227408400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |