Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratosolen_20solmsi_20marchali_20[refseq_20GCF_5F000503995.1_202013 -12-04] 2,457 sequences; 277,059,195 total letters Query= NC_000935.1 Length=36524 Score E Sequences producing significant alignments: (Bits) Value seq64 111 4e-20 >seq64 Length=39090 Score = 111 bits (122), Expect = 4e-20 Identities = 117/152 (77%), Gaps = 3/152 (2%) Strand=Plus/Plus Query 4854 TTGATGGTCATATACCACCCAATGATGCTTGTCATGTATCGTTTCTGATTTTGAAAAGCA 4913 ||||| |||| |||||| || ||||| |||||| || ||| ||| || ||||| ||||| Sbjct 1640 TTGATTGTCAGATACCAGCCGATGAT-CTTGTCGTGCATCTCTTCAGACTTTGAGAAGCA 1698 Query 4914 AATGGTTTTACGAGCAAGACGTTTGATGTGGGTACTTAAATTCAAATTATGCCGCTCTAT 4973 |||||||| || | ||| || || | || || | | ||||| |||||| |||||||| Sbjct 1699 TATGGTTTTGCGGGTAAGCCGCTTAAGATGTGTTCGCAGATTCAGATTATGTCGCTCTAT 1758 Query 4974 CCGCTGGGTATATT--TTGATTACTACATGAC 5003 ||||||||| |||| ||| | | ||||||| Sbjct 1759 CCGCTGGGTGTATTTCTTGCTGATAACATGAC 1790 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 116751793448124