Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratosolen_20solmsi_20marchali_20[refseq_20GCF_5F000503995.1_202013 -12-04] 2,457 sequences; 277,059,195 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq3 89.7 5e-13 >seq3 Length=17417032 Score = 89.7 bits (98), Expect = 5e-13 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 17228 TCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCT 17287 ||| |||| || || |||||||||||| ||||||||||| || | || ||||| || Sbjct 7878197 TCGGTTATGTAAGTGTCGATGAGTAGGGAATACATTTCGGAATGAACATTTTCCATCGCC 7878138 Query 17288 ATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCC 17347 | || || || || |||||||| || || | || || |||||| | ||| || || Sbjct 7878137 ACTTGGAAGCCATAGAAGCATCGAGCCTCTGTGATCTGGACTTCCTGGCTGAAGCGCTCG 7878078 Query 17348 GCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGC 17391 | ||||| || ||||| || || ||| |||||||| || || Sbjct 7878077 ACGAGATTCTCATTCACAATACCATCGGATGCGGCGAAGAAAGC 7878034 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517529704880760