Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratosolen_20solmsi_20marchali_20[refseq_20GCF_5F000503995.1_202013 -12-04] 2,457 sequences; 277,059,195 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq3 89.7 9e-13 >seq3 Length=17417032 Score = 89.7 bits (98), Expect = 9e-13 Identities = 138/195 (71%), Gaps = 4/195 (2%) Strand=Plus/Minus Query 189437 ACTCATGATCCTCTATGGAACGCGTCACAAATGCAGATGGTGAGAGAAGGAAAAATGCAT 189496 || |||||| | | ||||| || | |||||||| | | | ||||||||||||||| Sbjct 15630492 ACACATGATAATTTGTGGAATGCTGCTCAAATGCAACTAATAAAGGAAGGAAAAATGCAT 15630433 Query 189497 AGTTTTTTACGAATGTATTGGGCTAAGAAGATACTTGAATGGACTAGAACACCTGAAGAC 189556 ||||| | ||||||||||||||||| || | | ||||||||| || ||| || || Sbjct 15630432 GGTTTTCTGCGAATGTATTGGGCTAAAAAATTTTTAGAATGGACTGAAAAACCAGAGGAT 15630373 Query 189557 GCTTTGAGTTATAGT--ATCTATTTGAACAACAAGTACGAACTAGACGGCACGGATCCTA 189614 || |||| || || |||||||| || || || || | || || ||||| | Sbjct 15630372 GCATTGA--AATGGTCAATCTATTTAAATAATAAATATAGTATCGATGGTCAAGATCCAA 15630315 Query 189615 ACGGATACGTAGGTT 189629 | ||||| || |||| Sbjct 15630314 ATGGATATGTCGGTT 15630300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923168446318280