Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratosolen_20solmsi_20marchali_20[refseq_20GCF_5F000503995.1_202013 -12-04] 2,457 sequences; 277,059,195 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq13 84.2 4e-11 >seq13 Length=8037603 Score = 84.2 bits (92), Expect = 4e-11 Identities = 144/205 (70%), Gaps = 8/205 (4%) Strand=Plus/Minus Query 35249 TTCTGGAGAGGAGTTGTGGAAGAACTCTCGTGGTTCATCAGGGGCAATACAGACGCCAAA 35308 || ||| | ||||| || || ||| | |||||||| || || ||| | || ||| Sbjct 7580824 TTTTGGCGGGGAGTGGTCGAGGAATTACTTTGGTTCATTAGAGGTTCAACAAATGCAAAA 7580765 Query 35309 GAATTGGCC-AAGAAGAAGATACACATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGA 35367 ||||| | || |||| | ||||||| ||| | |||||| | || || ||||||||||| Sbjct 7580764 GAATTATCTGAAAAAGATG-TACACATTTGGGATGCTAATAGTTCACGTGAATTTTTGGA 7580706 Query 35368 CA---GTAGAGGGTTATACGATAGAGCAGAGGGAGATTTGGGACCCGTATACGGATTCCA 35424 ||| | || |||| ||| |||||||||||| || || || || || || || Sbjct 7580705 TTTATGTAAA---TTCACCGATCGAGAAGAGGGAGATTTAGGCCCTGTGTATGGCTTTCA 7580649 Query 35425 ATGGCGTCATTTTGGTGCTGAATAT 35449 |||| | || ||||| || ||||| Sbjct 7580648 ATGGAGACACTTTGGAGCAAAATAT 7580624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989552847586435