Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratosolen_20solmsi_20marchali_20[refseq_20GCF_5F000503995.1_202013 -12-04] 2,457 sequences; 277,059,195 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq13 86.0 9e-12 >seq13 Length=8037603 Score = 86.0 bits (94), Expect = 9e-12 Identities = 143/205 (70%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 70202 GATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGCACCAAATGGCACTACCA 70261 |||||| | || ||||||| | |||||||| || | | ||||||| || || Sbjct 7580159 GATAGGCGAATAATAATGTGTGCTTGGAATCCAATTGACATTCCAAAAATGGCTCTTCCT 7580100 Query 70262 CCGTGTCACTGTTTGGCTCAGTTTTACTCGTA--CGATGGCAAATTGTCATGCTTAATGT 70319 || ||||| | | | ||| ||||| ||| |||||| || | || || | | | Sbjct 7580099 CCTTGTCATATTCTTGTTCAATTTTAT--GTAGCCGATGGTGAACTTTCTTGTCAACTTT 7580042 Query 70320 ATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTGCAAGCTATTCTATGT 70379 | || || || ||||| || || |||||||| || ||||||||||| |||||| | | Sbjct 7580041 ACCAAAGAAGCGCCGATATAGGTCTCGGTGTGCCATTTAACATTGCTTCTTATTCTTTAT 7579982 Query 70380 TGACGCACATGATTGCTCACATTAC 70404 |||| ||||||||||||| || || Sbjct 7579981 TGACATACATGATTGCTCATATAAC 7579957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741036440219320