Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratosolen_20solmsi_20marchali_20[refseq_20GCF_5F000503995.1_202013 -12-04] 2,457 sequences; 277,059,195 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq2 93.3 4e-14 >seq2 Length=17806784 Score = 93.3 bits (102), Expect = 4e-14 Identities = 140/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 18844 CGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGTTTACC 18903 ||| || || ||||| || || || || | | |||| | | || |||| |||||||| Sbjct 3493381 CGTTGATTCTTTTTGGATGTTATAGTCGGATAATGTTCTTCCATCTTCCAATTGTTTACC 3493322 Query 18904 CGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTCTGTTT 18963 ||| |||| || | |||||||| || | || ||||| || |||||| ||| Sbjct 3493321 GGCAAAAATGAGACGTTGCTGATCTGGTGGAATTCCTTCTTTATCTTGAATTTTAGCTTT 3493262 Query 18964 TACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTACCTGTTAAAGT 19023 || | | | ||||||| || || ||| | ||||| ||||||||||| || || Sbjct 3493261 CACATTTTCAATAGTATCGGAAGCTTCAACTTCCAGTGTAATAGTTTTACCTGTCAATGT 3493202 Query 19024 TTTGACAAAAATTTGCATT 19042 ||||||||||||||||||| Sbjct 3493201 TTTGACAAAAATTTGCATT 3493183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414560385747058