Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratosolen_20solmsi_20marchali_20[refseq_20GCF_5F000503995.1_202013 -12-04] 2,457 sequences; 277,059,195 total letters Query= NC_005066.1 Length=164018 Score E Sequences producing significant alignments: (Bits) Value seq720 149 7e-31 >seq720 Length=915 Score = 149 bits (164), Expect = 7e-31 Identities = 139/177 (79%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 53628 TTCGGTAAAGGTACGCGCGATAACGTCACGCTGCTGGTCTGGAGTCAGACTATTGAAGCG 53687 ||| ||||||||||| ||||||||||| |||||||| ||||||||||| || ||||| Sbjct 316 TTCAGTAAAGGTACGGGCGATAACGTCGCGCTGCTGTTCTGGAGTCAGTGAGTTAAAGCG 375 Query 53688 CACCGCGTAACCAGAAACGCGAATTGTAAGCTGCGGGTACTTCTCAGGATGTTCAACAGC 53747 ||||| || ||||| ||||| || ||||| || ||||| || || ||||| ||||| || Sbjct 376 AACCGCATAGCCAGACACGCGGATGGTAAGTTGTGGGTATTTTTCTGGATGCTCAACGGC 435 Query 53748 GTCCAGCAACATTTCTCGTAACAATACGTTAATATTCAAATGCTGACCACCTTCAAC 53804 |||| || | |||| || || ||||| | |||| |||||||||||||| || Sbjct 436 ATCCATCAGCGTTTCGCGGCGCAGCACGTTTACGTTCAGGTGCTGACCACCTTCCAC 492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 524713484242160