Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratosolen_20solmsi_20marchali_20[refseq_20GCF_5F000503995.1_202013 -12-04] 2,457 sequences; 277,059,195 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq516 91.5 2e-13 >seq516 Length=1145 Score = 91.5 bits (100), Expect = 2e-13 Identities = 198/294 (67%), Gaps = 2/294 (1%) Strand=Plus/Plus Query 193716 GTTGATGCTTTAGGAACTCTTAGAATACTTGAAGCAGTTCGTATGTTGGGAATGGAGAAA 193775 ||||||||| | || || || | | || |||||| | || | | || | ||||| Sbjct 773 GTTGATGCTATGGGTACGCTGCGTCTGCTGGAAGCAATCCGCTTCCTCGGCCTTGAGAAG 832 Query 193776 GATGTTCGCATCTATCAGGCATCTACCAGCGAACTGTATGGTGGTGTTCTAGGCACTCC- 193834 | ||| |||| |||||||| ||| || ||||| ||| || | ||| | ||| Sbjct 833 AAAACGCGCTTCTACCAGGCATCCACCTCTGAGCTGTACGGTCTGGTGC-AGGAAATCCC 891 Query 193835 ACTATCAGAAACCACACCATTTCATCCACGCTCTCCTTATGGTGTAGCAAAGTTGTATGG 193894 || ||||||||| || || | || |||||||| |||| |||||||| |||| | Sbjct 892 ACAGAAAGAAACCACTCCGTTCTACCCGCGCTCTCCGTATGCGGTAGCAAAACTGTACGC 951 Query 193895 TTATTGGATCATCAAGAATTATCGTGAGTCATATGGATTCCACGCTAGTTCTGGTATTCT 193954 || ||||||| | ||| || ||||| || || || | |||| || || || || Sbjct 952 CTACTGGATCACCGTGAACTACCGTGAATCCTACGGCATGTACGCCTGTAACGGCATCCT 1011 Query 193955 CTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTGTAACTCGTAAGATTAC 194008 ||||| ||||||||||| | | || || || || || || || || || || Sbjct 1012 GTTCAACCACGAATCTCCGCGTCGCGGCGAAACCTTCGTGACCCGCAAAATCAC 1065 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807530397960920