Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratosolen_20solmsi_20marchali_20[refseq_20GCF_5F000503995.1_202013 -12-04] 2,457 sequences; 277,059,195 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq3 82.4 8e-11 >seq3 Length=17417032 Score = 82.4 bits (90), Expect = 8e-11 Identities = 74/92 (80%), Gaps = 1/92 (1%) Strand=Plus/Minus Query 21179 CCCATTTTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGAT 21238 ||||||||| |||| || | ||| | || || || ||||||||||| ||||||||||| Sbjct 7879284 CCCATTTTT-GATATTCTCCAACCTTCTTCTCAAAGAAATTTGTCTTCCCTTCCAATGAA 7879226 Query 21239 ATAGATTCCATAAAATCAAATGGATTTTCAGA 21270 || |||||||| ||||||||||| ||||| Sbjct 7879225 ATGTGCTCCATAAAGTCAAATGGATTGTCAGA 7879194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531884463996680