Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratosolen_20solmsi_20marchali_20[refseq_20GCF_5F000503995.1_202013 -12-04] 2,457 sequences; 277,059,195 total letters Query= NC_007023.1 Length=180500 Score E Sequences producing significant alignments: (Bits) Value seq720 190 2e-43 >seq720 Length=915 Score = 190 bits (210), Expect = 2e-43 Identities = 180/230 (78%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 51876 TCGCAAAACGTGAAGTTGATATTGAGTTTCAACCGACTGTTAAAGTTGAAGGTGGACAGC 51935 ||| | | ||||||||| ||| || | || ||| || || |||||||| |||| Sbjct 536 TCGAATACCGTGAAGTTCCTATGGAAGTGCAGCCGGAAGTGCGCGTGGAAGGTGGTCAGC 477 Query 51936 ACCTAAACGTGAATGTGCTACGTCGCGAAACCCTGGAAGATGCTGTGAAACATCCTGAGA 51995 |||| ||||| || ||||| || |||||||| ||| ||||| || | ||||| || | Sbjct 476 ACCTGAACGTAAACGTGCTGCGCCGCGAAACGCTGATGGATGCCGTTGAGCATCCAGAAA 417 Query 51996 AGTACCCACAGTTAACGATCCGCGTTTCAGGTTATGCAGTTCGCTTTAATGCACTGACTC 52055 | |||||||| | || |||||||| || || ||||| ||||||||||| ||||||||| Sbjct 416 AATACCCACAACTTACCATCCGCGTGTCTGGCTATGCGGTTCGCTTTAACTCACTGACTC 357 Query 52056 CAGAACAACAGCGCGACGTTATCGCCAGAACCTTTACGGAAAGCATGTAA 52105 ||||||| |||||||||||||||||| | |||||||| |||||| ||||| Sbjct 356 CAGAACAGCAGCGCGACGTTATCGCCCGTACCTTTACTGAAAGCCTGTAA 307 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 577454264391200