Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratosolen_20solmsi_20marchali_20[refseq_20GCF_5F000503995.1_202013 -12-04] 2,457 sequences; 277,059,195 total letters Query= NC_008252.1 Length=84264 Score E Sequences producing significant alignments: (Bits) Value seq1 114 7e-21 >seq1 Length=27400720 Score = 114 bits (126), Expect = 7e-21 Identities = 129/173 (75%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 25659 TGGGGTGGTTTGCCAGAAAATCAAATATGTGCGGCGTCACCAGGAGGCGGTAAAGACGCG 25718 ||||| ||| | || || ||||| ||||| || | || | || |||||||| || Sbjct 18377314 TGGGGAGGTCTTCCTGAGGGACAAATTTGTGCTGCTTATCCTGCCGGTGGTAAAGATGCT 18377373 Query 25719 TGTCAAGGTGATTCGGGTGGACCAATGGTTGTTAACGATAGATTGGCTGGAATCGTGTCG 25778 || ||||||||||| || ||||| | || |||||| | || ||||||||||| || Sbjct 18377374 TGCCAAGGTGATTCTGGCGGACCCCTCGTCATTAACGGACGTTTAGCTGGAATCGTTTCA 18377433 Query 25779 TGGGGAAATGGGTGTGGTAGAAATGGTTGGCCAGGTGTTTACACCGAAGTGGC 25831 ||||| ||||| |||| ||| || |||| ||||| ||||||||||| || || Sbjct 18377434 TGGGGCAATGGATGTGCTAGGAAAGGTTATCCAGGAGTTTACACCGAGGTTGC 18377486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 269511929307825