Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratosolen_20solmsi_20marchali_20[refseq_20GCF_5F000503995.1_202013 -12-04] 2,457 sequences; 277,059,195 total letters Query= NC_009382.1 Length=38760 Score E Sequences producing significant alignments: (Bits) Value seq450 82.4 2e-11 >seq450 Length=1262 Score = 82.4 bits (90), Expect = 2e-11 Identities = 139/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 2957 GCGTACGGCGCGAACCGCACCACCTCGTCACCGATCCAATCGTTGATTGCCAACAGGCGG 3016 ||||| || ||| || | |||||| ||||| | ||| ||||| | | || | Sbjct 342 GCGTAAGGGTTGAAGCGAATCACCTCCTCACCCAGCCAGTCGTTAAGATGCTTCATGGCT 401 Query 3017 TCC-TGCAGGGGCTTCACCTCGTTGCGCGCGAACACCATCGCCGCCTTCTCCACGTCGCC 3075 ||| ||||||| | || ||||||| || ||||| ||||| ||||| | || || Sbjct 402 TCCATGCAGGGTGT-CAGCTCGTTGACGGCTAACACGCGGGCCGCTTTCTCAATATCACC 460 Query 3076 GAATCCGCCGGTGTTGTTCGGAATGATGCCCATGAGCTGCGGCGGTACGCGGTGCGCGGC 3135 |||| ||| | | ||||||| |||||| || ||||||||||| |||||||| || Sbjct 461 GAATGAACCGTTCCCTTCCGGAATGGCGCCCATCAGTTGCGGCGGTACCCGGTGCGCTGC 520 Query 3136 GAGCTGGTCGTCGCGCGTG 3154 ||| ||| ||||| ||| Sbjct 521 CAGCATGTCATCGCGGGTG 539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123906784681748