Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratosolen_20solmsi_20marchali_20[refseq_20GCF_5F000503995.1_202013 -12-04] 2,457 sequences; 277,059,195 total letters Query= NC_011273.1 Length=164602 Score E Sequences producing significant alignments: (Bits) Value seq223 253 2e-62 >seq223 Length=2082 Score = 253 bits (280), Expect = 2e-62 Identities = 315/428 (74%), Gaps = 4/428 (1%) Strand=Plus/Minus Query 156450 CAACACCGCCGACATGATCCGGCTCATCATCCGGGACGAGGCCGTGCACGGCTACTACAT 156509 |||||||||||| |||| ||||||||||| || || || || |||||||| || ||||| Sbjct 2082 CAACACCGCCGATTTGATTCGGCTCATCATTCGCGATGAAGCGGTGCACGGGTATTACAT 2023 Query 156510 CGGCTACAAGTTCCAGAAGGGCCTGGAGAAGGAGACCAAGGCCCGCCAGCAGGAACTCAA 156569 ||||| |||| ||||| || |||||||| | | | |||| | |||| || || Sbjct 2022 TGGCTATAAGTATCAGAAAGGGCTGGAGAAAGTCAGCGAGGCGAAGCGCGAGGAGCTTAA 1963 Query 156570 GGACTACACCTATGAGCTGCTGTTCGAGCTGTTCGACAACGAGCAGGAGTACACCCAGGA 156629 | || | || ||||| | || |||| ||||||||||| | || || |||| Sbjct 1962 AGGCTTTGCACTCGATTTGCTGATGGATCTGTACGACAACGAGCTGAGCTATACGGAGGA 1903 Query 156630 CCTCTACGACGCCACCGGCCAGACCGAGGACGTGAAGAAGTTCCTGCGGTACAACGGCAA 156689 ||||||| || ||||||| | || ||||||||| ||||| | ||||||| ||| Sbjct 1902 ACTCTACGCCGGCACCGGCTGGGAGGACGACGTGAAGGCTTTCCTCTGCTACAACGCCAA 1843 Query 156690 CAAGGCCCTGCAGAACCTGGGCTACGACGCGCTGTTCAGCCG-CAGCGACTGC-GACGTC 156747 |||||| ||| ||||||||||||||||||||| ||| ||| | | || || || || Sbjct 1842 CAAGGCGCTGATGAACCTGGGCTACGACGCGCTTTTC--CCGCCGGAGATGGCGGAGGTG 1785 Query 156748 AACCCGGCCATCCTGAGCGCGCTGTCGCCCGGTGGAGACGAGAACCACGACTTCTTCTCG 156807 |||||||| || ||| |||||||||||| || ||||| |||||||| ||||||||| Sbjct 1784 AACCCGGCGATTCTGGCTGCGCTGTCGCCCAATGCCGACGAAAACCACGATTTCTTCTCG 1725 Query 156808 GGGTCGGGCAGCACGTACGTCATGGCCAAGGGTGTGGTCACCGAAGACGACGACTGGGAC 156867 || || ||| |||| || |||| ||| | |||| ||||| || || |||||||| Sbjct 1724 GGATCTGGCTCATCGTATGTGATGGGCAAAGCGGTGGAAACCGAGGATGAAGACTGGGAT 1665 Query 156868 TTCTGATG 156875 || | ||| Sbjct 1664 TTTTAATG 1657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 526582226846640