Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratosolen_20solmsi_20marchali_20[refseq_20GCF_5F000503995.1_202013 -12-04] 2,457 sequences; 277,059,195 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq5 82.4 6e-11 >seq5 Length=15084686 Score = 82.4 bits (90), Expect = 6e-11 Identities = 95/128 (74%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 118169 CGACAGTTTTCCGTCGCGACCGGCCCTTCCTATCTCTTGATAATAACCGTCCAGTGATTT 118228 |||| ||| |||||||| || || || || ||||||||||| | |||| ||||| Sbjct 5579800 CGACTTTTTACCGTCGCGTCCTGCTCTACCGCTCTCTTGATAAAAGTTCTCCATGGATTT 5579859 Query 118229 GGGCATACTGTGATGTATCACCAACCGCACGTCGGGTTTATCGATGCCCATCCCGAACGC 118288 || || | ||| || || || || ||||| || ||||| |||||||||| || || || Sbjct 5579860 GGAAATGCAGTGGTGAATGACGAATCGCACATCCGGTTTGTCGATGCCCAAGCCAAATGC 5579919 Query 118289 TATCGTCG 118296 ||| |||| Sbjct 5579920 TATTGTCG 5579927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381761367932808