Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratosolen_20solmsi_20marchali_20[refseq_20GCF_5F000503995.1_202013 -12-04] 2,457 sequences; 277,059,195 total letters Query= NC_012635.1 Length=168394 Score E Sequences producing significant alignments: (Bits) Value seq720 212 7e-50 seq151 86.0 7e-12 >seq720 Length=915 Score = 212 bits (234), Expect = 7e-50 Identities = 159/187 (85%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 63137 GCCATTACAAACTCTCAGTAAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCA 63196 ||| ||||| || |||||||||||||| ||||||||||||||||||||||| ||||||| Sbjct 303 GCCGTTACAGGCTTTCAGTAAAGGTACGGGCGATAACGTCGCGCTGCTGTTCTGGAGTCA 362 Query 63197 GAGAGTTAAAGCGAACTGCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCG 63256 | |||||||||||||| ||||| || || || |||||||| || || || |||||||| | Sbjct 363 GTGAGTTAAAGCGAACCGCATAGCCAGACACGCGGATGGTAAGTTGTGGGTATTTTTCTG 422 Query 63257 GATGCTTAACTGCATCTTCCAGAGTTTCACGACGCAGAACGTTAACGTTCAGGTGTTGAC 63316 |||||| ||| ||||| ||| ||||| || ||||| ||||| ||||||||||| |||| Sbjct 423 GATGCTCAACGGCATCCATCAGCGTTTCGCGGCGCAGCACGTTTACGTTCAGGTGCTGAC 482 Query 63317 CACCTTC 63323 ||||||| Sbjct 483 CACCTTC 489 >seq151 Length=3046 Score = 86.0 bits (94), Expect = 7e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 71584 TGGTGCTGATTGACGGAATCGAACCGCCGACCTTCTCATTACAAGTGAGTTGCTCTACCT 71643 |||||| || | ||||||||||| | ||||| || ||||||||| ||||||||||||| Sbjct 1203 TGGTGCCGACTACCGGAATCGAACTGGTGACCTACTGATTACAAGTCAGTTGCTCTACCT 1144 Query 71644 ACTGAGCTAAATCAGCA 71660 |||||||||| || ||| Sbjct 1143 ACTGAGCTAAGTCGGCA 1127 Score = 84.2 bits (92), Expect = 2e-11 Identities = 66/78 (85%), Gaps = 1/78 (1%) Strand=Plus/Minus Query 72414 ATTGGAGCGGATAATGAGAATCGAACTCACATCATCAGATTGGAAGTCTGAGGTAATA-C 72472 |||||||||| | | ||||||||| | ||||||||| ||||||| ||||||||||| | Sbjct 1490 ATTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTGAGGTAATAGC 1431 Query 72473 CATTATACGATATCCGCA 72490 ||||||||||| ||||| Sbjct 1430 CATTATACGATGCCCGCA 1413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 538716254168880