Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratosolen_20solmsi_20marchali_20[refseq_20GCF_5F000503995.1_202013 -12-04] 2,457 sequences; 277,059,195 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq3 98.7 1e-15 >seq3 Length=17417032 Score = 98.7 bits (108), Expect = 1e-15 Identities = 156/223 (70%), Gaps = 3/223 (1%) Strand=Plus/Minus Query 119515 CTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTCT 119574 |||| ||||| || || || ||||||||||| ||||||||||| |||||||| || | Sbjct 7878544 CTTCGTCCCGCGAAATCAGTTCATTACTGAATGTCAGTCCAGGCATTAGTCCTCTCTTTT 7878485 Query 119575 TTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGCGAAAG 119634 | ||||| || |||||| ||||| ||| |||||||| ||||| || || || | Sbjct 7878484 TCAGCCAGAATATGGCAGCGAAACTGCCACTGAAGAAGATTCCCTCGACCGCAGCAAAGG 7878425 Query 119635 CGAATAGACGCTCAGCAAAAGGTCGAGACTTGTCG---AACCACTTGAGAGCCCAGTTGG 119691 | | || ||||| ||||| | | || || | | ||| || | |||||| || | Sbjct 7878424 CAATTACGCGCTCGGCAAACGTAGCACTCTCGTGGTTAATCCAGTTCAAAGCCCAATTAG 7878365 Query 119692 CCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAAG 119734 | || ||| |||||| | |||| |||||| | ||| || Sbjct 7878364 CTTTTTTAGCTACGCAGGGCAGTGTTTCGATGGCGTTGAATAG 7878322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588957911074600