Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratosolen_20solmsi_20marchali_20[refseq_20GCF_5F000503995.1_202013 -12-04] 2,457 sequences; 277,059,195 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq25 95.1 1e-14 >seq25 Length=3995362 Score = 95.1 bits (104), Expect = 1e-14 Identities = 166/242 (69%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 154863 CTGTCATGTATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTAGA 154922 || || ||| | |||||||| || ||||| || | || || ||||| | || | Sbjct 523447 CTCTCGTGTTTAATGATTACGTATCCATCGACGAACGGCGTGTTTGAGGAGACAATCGGC 523388 Query 154923 CAGATATGTAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTA 154982 | | ||| | | |||||| | |||||||| || ||| | ||||| || ||| | Sbjct 523387 GACGTTTGTGAACTTGTTCATAAAGCCGGTGGTCAAGTTTATTTAGATGGGGCGAATATG 523328 Query 154983 AATGCACAGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAAC 155042 || || ||||||||||| | ||| | || ||||| || |||| || || || Sbjct 523327 AACGCGCAGGTAGGACTCTGCAGACCTGGCGATTATGGCAGTGACGTATCACACCTCAAT 523268 Query 155043 TTACATAAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGT 155102 | ||||||||||| || || || ||||| |||||||| ||||| | ||||| || ||| Sbjct 523267 CTGCATAAAACATTTTGCATACCGCATGGCGGTGGAGGCCCTGGAATGGGTCCGATCGGT 523208 Query 155103 GT 155104 || Sbjct 523207 GT 523206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579195010926880