Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratosolen_20solmsi_20marchali_20[refseq_20GCF_5F000503995.1_202013 -12-04] 2,457 sequences; 277,059,195 total letters Query= NC_016158.1 Length=49576 Score E Sequences producing significant alignments: (Bits) Value seq151 87.8 6e-13 seq184 82.4 2e-11 >seq151 Length=3046 Score = 87.8 bits (96), Expect = 6e-13 Identities = 60/68 (88%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 44450 TCGTAGTTTGGGAATTACGTCTGGCTTCCAAGCTGATGATGCGGGTTCGATTCCCGCTGC 44509 ||||| ||| ||||| || | |||||||||||||||||||||||||||||||||||| Sbjct 1421 TCGTATAATGGCTATTACCTCAGCCTTCCAAGCTGATGATGCGGGTTCGATTCCCGCTGC 1480 Query 44510 CCGCTCCA 44517 |||||||| Sbjct 1481 CCGCTCCA 1488 >seq184 Length=2459 Score = 82.4 bits (90), Expect = 2e-11 Identities = 47/48 (98%), Gaps = 0/48 (0%) Strand=Plus/Minus Query 25962 CTTCTAAGCCGTAGGTCGTAGGTTCGAATCCTACAGGGCGTGCCATTT 26009 ||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 2069 CTTCTAAGCCGTAGGTCGTAGGTTCGAATCCTACAGGGCGTGCCACTT 2022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 158516974835092