Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratosolen_20solmsi_20marchali_20[refseq_20GCF_5F000503995.1_202013 -12-04] 2,457 sequences; 277,059,195 total letters Query= NC_019398.1 Length=178193 Score E Sequences producing significant alignments: (Bits) Value seq720 206 3e-48 >seq720 Length=915 Score = 206 bits (228), Expect = 3e-48 Identities = 186/234 (79%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 50956 TCGCAAAACGTGAAGTTGATATTGAATTTCAACCCACTGTTAAAGTGGAAGGTGGACAAC 51015 ||| | | ||||||||| ||| ||| | || || || ||||||||||| || | Sbjct 536 TCGAATACCGTGAAGTTCCTATGGAAGTGCAGCCGGAAGTGCGCGTGGAAGGTGGTCAGC 477 Query 51016 ACTTAAACGTAAACGTGTTGCGCCGCGAAACTCTGGAAGATGCTGTGAAGCATCCAGAAA 51075 || | |||||||||||| ||||||||||||| ||| ||||| || |||||||||||| Sbjct 476 ACCTGAACGTAAACGTGCTGCGCCGCGAAACGCTGATGGATGCCGTTGAGCATCCAGAAA 417 Query 51076 AATACCCACAGTTAACGATCCGTGTGTCCGGCTATGCAGTGCGTTTCAATTCACTGACTC 51135 |||||||||| | || ||||| ||||| |||||||| || || || || |||||||||| Sbjct 416 AATACCCACAACTTACCATCCGCGTGTCTGGCTATGCGGTTCGCTTTAACTCACTGACTC 357 Query 51136 CTGAACAACAGCGCGACGTTATCGCCCGAACCTTTACAGAGAGTCTATAATGGC 51189 | ||||| |||||||||||||||||||| |||||||| || || || ||| ||| Sbjct 356 CAGAACAGCAGCGCGACGTTATCGCCCGTACCTTTACTGAAAGCCTGTAACGGC 303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570072091123160