Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratosolen_20solmsi_20marchali_20[refseq_20GCF_5F000503995.1_202013 -12-04] 2,457 sequences; 277,059,195 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq3 100 5e-16 >seq3 Length=17417032 Score = 100 bits (110), Expect = 5e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 241490 TTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCAT 241549 ||||||| || || || ||||| |||| | ||||| || || ||||| | |||||| Sbjct 10696097 TTGAGCAATTTGACCTTGTCCTCGAGCCTGGATATGCGCTCGAGCTTGCGTCTGCGGCAC 10696038 Query 241550 TTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCC 241609 |||| ||| || | |||||| || | | |||||| || |||||| ||||||||| | Sbjct 10696037 TTGGAGGCGGCGACGCGGTTTCGCTGACGCTTACGCTCGAGCTTGATCCGTTCCTGGGAC 10695978 Query 241610 TCCATGTCGATCGGAGACTTGGG 241632 ||||||||||| || ||| |||| Sbjct 10695977 TCCATGTCGATGGGCGACATGGG 10695955 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931504190298880