Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratosolen_20solmsi_20marchali_20[refseq_20GCF_5F000503995.1_202013 -12-04] 2,457 sequences; 277,059,195 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq3 91.5 3e-13 >seq3 Length=17417032 Score = 91.5 bits (100), Expect = 3e-13 Identities = 107/142 (75%), Gaps = 2/142 (1%) Strand=Plus/Plus Query 25834 TGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTT 25893 ||||| |||| ||||| ||| | |||| |||||||||| |||||| | | |||||| Sbjct 7878370 TGGGCTTTGAACTGGATTAACCACGAGAGTGCTACGTTTGCCGAGCGCGTAATTGCCTTT 7878429 Query 25894 GCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAG 25953 ||||| || ||||| ||||| ||||| || || || ||||| |||||||| || || Sbjct 7878430 GCTGCGGTCGAGGGAATCTTCTTCAGTGGCAGTTTCGCTGCCATATTCTGGCTGAAAAAG 7878489 Query 25954 AAGGGGAC-CATGCCCGGGCTG 25974 || |||| ||||| || ||| Sbjct 7878490 -AGAGGACTAATGCCTGGACTG 7878510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928816272854080