Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratosolen_20solmsi_20marchali_20[refseq_20GCF_5F000503995.1_202013 -12-04] 2,457 sequences; 277,059,195 total letters Query= NC_019522.1 Length=48454 Score E Sequences producing significant alignments: (Bits) Value seq157 107 6e-19 >seq157 Length=2930 Score = 107 bits (118), Expect = 6e-19 Identities = 105/131 (80%), Gaps = 6/131 (5%) Strand=Plus/Minus Query 378 TTTAAAATCCCTCGGCGTTCGCGCTGTGCGGGTTCAAGTCCCGCCCCGGGCACCATTGAT 437 |||||||||||||||||||||||||||| ||||||||||||| | |||| |||| || Sbjct 2868 TTTAAAATCCCTCGGCGTTCGCGCTGTGTGGGTTCAAGTCCCACTCCGGCTACCA-TGGG 2810 Query 438 TTAAAAAGAATTAAAACAAGCACTTATGTGCAATGTCGT-AGACCGCCGAGAGGCGGttt 496 | |||||| ||| ||||| || ||| |||||| | ||| |||| ||| ||||| Sbjct 2809 AAACAAAGAA-TAATCAAAGCA---ATAAGCAGTGTCGTGAAACCACCGAAAGGTGGTTT 2754 Query 497 ttttGTGCCTG 507 ||||||||||| Sbjct 2753 TTTTGTGCCTG 2743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 154926679591744