Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratosolen_20solmsi_20marchali_20[refseq_20GCF_5F000503995.1_202013 -12-04] 2,457 sequences; 277,059,195 total letters Query= NC_019530.1 Length=157785 Score E Sequences producing significant alignments: (Bits) Value seq412 87.8 2e-12 seq282 82.4 8e-11 >seq412 Length=1338 Score = 87.8 bits (96), Expect = 2e-12 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 137811 TGTAGTTCAGTCGGTAGAACGGTGGACTGTTAATCCATATGTCGCAGGTTCAAGTCCTGC 137870 |||||||||||||||||||||| ||||||||||||| |||||| | ||||| ||||| | Sbjct 378 TGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGT 437 Query 137871 CATCGTCGCCAAATTGAA 137888 || | |||||||| || Sbjct 438 CAGAGGAGCCAAATTTAA 455 >seq282 Length=1752 Score = 82.4 bits (90), Expect = 8e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 137811 TGTAGTTCAGTCGGTAGAACGGTGGACTGTTAATCCATATGTCGCAGGTTCAAGTCCTGC 137870 ||||||||||||||||||||| ||||||||||||| |||||| | ||||| ||||| | Sbjct 1117 TGTAGTTCAGTCGGTAGAACGCCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGT 1058 Query 137871 CATCGTCGCCAAATT 137885 || | |||||||| Sbjct 1057 CAGAGGAGCCAAATT 1043 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 504768496821400