Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratosolen_20solmsi_20marchali_20[refseq_20GCF_5F000503995.1_202013 -12-04] 2,457 sequences; 277,059,195 total letters Query= NC_019704.1 Length=44375 Score E Sequences producing significant alignments: (Bits) Value seq460 318 2e-82 >seq460 Length=1249 Score = 318 bits (352), Expect = 2e-82 Identities = 233/271 (86%), Gaps = 0/271 (0%) Strand=Plus/Minus Query 21607 TTATAGGCCAACCTGGCGAACAGTCGGGAACTCTGAAACCAACCACATATCGGACTCTTC 21666 ||| || |||||||||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct 1154 TTAAAGTCCAACCTGGCGAACGGTCGGGAACTCAGAAACCAACCACATATCGGACTCTTC 1095 Query 21667 AAACATTTCCTCCAGCATGCGGTTCAGTTTTTCCCGATCGCTTTTGCTGGCATCGCTGTT 21726 |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| || Sbjct 1094 AAACATTTCCTCGAGCATGCGGTTCAGTTTTTCCCGATCGCTTTTGCTTGCATCGCTATT 1035 Query 21727 TAAGCCGTTCGCCTGCATCGGCTTAACCTTCACTTCTGCATCCGGAAAGATCCGGTGCAC 21786 |||||||| |||||||||||||| ||||||||||| ||||| || || ||| ||||||| Sbjct 1034 CAAGCCGTTTGCCTGCATCGGCTTTACCTTCACTTCGGCATCAGGGAAAATCTGGTGCAC 975 Query 21787 TCGCTTTGTTAACTCATTCAGAATTATTTCTCTGGCACCTGTTAATCCTTCAACATTCCG 21846 ||||| || | ||| |||||| || |||||||| ||| | || |||||||| || Sbjct 974 CCGCTTCGTCAGCTCGGCCAGAATGATCTCTCTGGCCCCTTCGAGCCCCTCAACATTACG 915 Query 21847 TTTGTCGTACACCAACTCAACGAACATACCG 21877 ||||| || |||| ||||| ||||||||| Sbjct 914 CTTGTCATAAACCAGTTCAACAAACATACCG 884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141874260431658