Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratosolen_20solmsi_20marchali_20[refseq_20GCF_5F000503995.1_202013 -12-04] 2,457 sequences; 277,059,195 total letters Query= NC_019710.1 Length=40710 Score E Sequences producing significant alignments: (Bits) Value seq460 682 0.0 >seq460 Length=1249 Score = 682 bits (756), Expect = 0.0 Identities = 531/630 (84%), Gaps = 16/630 (3%) Strand=Plus/Minus Query 20085 TCCATTCTGGAGAACGGTCGGGAACTCAGAAACCAGCCACATATCGGACTCTTCAAACAT 20144 |||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1148 TCCAACCTGGCGAACGGTCGGGAACTCAGAAACCAACCACATATCGGACTCTTCAAACAT 1089 Query 20145 TTCCTCCAGCATGCGGTTCAGTTTTTCCCGATCACTTTTGCTGGCATCGCTATTTAAACC 20204 |||||| |||||||||||||||||||||||||| |||||||| ||||||||||| || || Sbjct 1088 TTCCTCGAGCATGCGGTTCAGTTTTTCCCGATCGCTTTTGCTTGCATCGCTATTCAAGCC 1029 Query 20205 GTTCGCCTGCATTGGCTTCACCTTCACTTCGGCATCGGGGAAAATCTGGTGCACCCGCTT 20264 ||| |||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct 1028 GTTTGCCTGCATCGGCTTTACCTTCACTTCGGCATCAGGGAAAATCTGGTGCACCCGCTT 969 Query 20265 CTTCAACTCGGCCAGTATGATCTCTCTGGCCCCTTTGAGCCCCTCAACATTACGCTTGTC 20324 | ||| ||||||||| ||||||||||||||||||| |||||||||||||||||||||||| Sbjct 968 CGTCAGCTCGGCCAGAATGATCTCTCTGGCCCCTTCGAGCCCCTCAACATTACGCTTGTC 909 Query 20325 ATAAACTAGTTCAACGAACATAACCATCC-CT------------CTCGCT-TACTTGATC 20370 |||||| |||||||| |||||| | |||| || || || | ||||||| Sbjct 908 ATAAACCAGTTCAACAAACATACCGATCCTCTTATAAGTGAAAACTGCCTGTGCTTGATC 849 Query 20371 TCTGCAAATAAAAATACTACTGTATTCATATACAGTCAATGTGTCA-TGAGGGCTATACT 20429 | | |||||||||| |||||| ||||||| |||| | | |||||| | | | Sbjct 848 TGTTTTCGTAAAAATACTGCTGTATATGCATACAGTAAATGAGCGAGTGAGGG-TGCATT 790 Query 20430 TATGCCTCGTAAATCAGATATTCATGCAGCTTTTTTAGCCTCTATAGAACAGAATCAAAA 20489 |||||||||| || | ||||||||||| |||||| | || | ||| | || || | || Sbjct 789 TATGCCTCGTCAACCGGATATTCATGCTGCTTTTATTGCGGCCATACAGCAAAACCCGAA 730 Query 20490 GGGTTACCTTTGTCTCAATACAAATAAATTCATCAATAAGTTGCGCGAGAAGAGCTGGCA 20549 ||| || || ||||| ||||| | || |||||| | | ||| ||| | |||||| Sbjct 729 GGGCTATCTCTGTCTGCATACAGACAAGTTCATCGCTGAACTGCAGGAGGGGCACTGGCA 670 Query 20550 TTTCAGCCAGGCGGATGCAAATACATGGATCGAGCGATACCAGCCGGACTTCGCCGATAA 20609 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 669 TTTCAGCCAGGCGGATGCAAATACATGGATCGAGCGATACCAGCCGGACTTCGCCGATAA 610 Query 20610 GACGACAAACGGCAGCCAGAACCGGTACTGGATCCTGCGTAACATGGGGAGGGTTTTCTA 20669 |||||||||||| ||| |||||| |||||||||||||||||||||||||||||||||||| Sbjct 609 GACGACAAACGGAAGCGAGAACCAGTACTGGATCCTGCGTAACATGGGGAGGGTTTTCTA 550 Query 20670 ATGGGCTTTCCTTCGCCGGCTACGGATTAC 20699 ||||| ||||| ||||| |||| ||||||| Sbjct 549 ATGGGATTTCCATCGCCAGCTATGGATTAC 520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130146602618048