Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratosolen_20solmsi_20marchali_20[refseq_20GCF_5F000503995.1_202013 -12-04] 2,457 sequences; 277,059,195 total letters Query= NC_019717.1 Length=45366 Score E Sequences producing significant alignments: (Bits) Value seq460 823 0.0 >seq460 Length=1249 Score = 823 bits (912), Expect = 0.0 Identities = 526/570 (92%), Gaps = 2/570 (0%) Strand=Plus/Minus Query 21454 TCAGCAACCAGCCACATGTCAGATTCTTCAAACATCTCTTCAAGCATACGATTAAGCCGT 21513 |||| ||||| |||||| || || ||||||||||| || || ||||| || || || | Sbjct 1123 TCAGAAACCAACCACATATCGGACTCTTCAAACATTTCCTCGAGCATGCGGTTCAGTTTT 1064 Query 21514 TCTTTCTCTGTTTT-CGTGCAGTTGCTGTTTAGCGCGTTCGCCTGCATCGGCTTTACCTT 21572 || || |||| | |||| | ||| || | |||| |||||||||||||||||||| Sbjct 1063 TCCCGATCGCTTTTGCTTGCA-TCGCTATTCAAGCCGTTTGCCTGCATCGGCTTTACCTT 1005 Query 21573 CACTTCGGCACCAGGGAAAATCTGGTGCACCCGCTTCGTCAGTTCGGCCAGAATGATCTC 21632 |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1004 CACTTCGGCATCAGGGAAAATCTGGTGCACCCGCTTCGTCAGCTCGGCCAGAATGATCTC 945 Query 21633 CCTGGCCCCTTCGAGCCCCTCAACATTTCGCTTGTCATAAACCAGTTCAACAAACATACC 21692 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 944 TCTGGCCCCTTCGAGCCCCTCAACATTACGCTTGTCATAAACCAGTTCAACAAACATACC 885 Query 21693 GATCCTCTTATAAGTGAAAACTGCCTGTGCTTGATCTGTTTTCATAAAAATACTACTGTA 21752 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct 884 GATCCTCTTATAAGTGAAAACTGCCTGTGCTTGATCTGTTTTCGTAAAAATACTGCTGTA 825 Query 21753 TATACATACAGTCAATGAGCGAGTGAGGGTGCATTTATGCCTCGTCAACCGGATATTCGT 21812 ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 824 TATGCATACAGTAAATGAGCGAGTGAGGGTGCATTTATGCCTCGTCAACCGGATATTCAT 765 Query 21813 GCTGCTTTTATTGCGGCCATACAGCAAAACCCGAAGGGCTATCTCTGTCTGCATACAGAC 21872 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 764 GCTGCTTTTATTGCGGCCATACAGCAAAACCCGAAGGGCTATCTCTGTCTGCATACAGAC 705 Query 21873 AAGTTCATCGCTGAACTGCAGGAGAGGAACTGGCATTTCAGTCAGGCGGATGCAAATACA 21932 |||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||| Sbjct 704 AAGTTCATCGCTGAACTGCAGGAGGGGCACTGGCATTTCAGCCAGGCGGATGCAAATACA 645 Query 21933 TGGATCGAGCGATACCAGCCGGACTTCGCCGATAAGACGACAAACGAAAGCGAGAACCGG 21992 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | Sbjct 644 TGGATCGAGCGATACCAGCCGGACTTCGCCGATAAGACGACAAACGGAAGCGAGAACCAG 585 Query 21993 TACTGGATCCTGCGTAACATGGGGAGGGTT 22022 |||||||||||||||||||||||||||||| Sbjct 584 TACTGGATCCTGCGTAACATGGGGAGGGTT 555 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145045367905952