Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratosolen_20solmsi_20marchali_20[refseq_20GCF_5F000503995.1_202013 -12-04] 2,457 sequences; 277,059,195 total letters Query= NC_019932.1 Length=29564 Score E Sequences producing significant alignments: (Bits) Value seq157 82.4 1e-11 >seq157 Length=2930 Score = 82.4 bits (90), Expect = 1e-11 Identities = 109/148 (74%), Gaps = 4/148 (3%) Strand=Plus/Plus Query 19838 GGTCAACTTACCCACGTGCTGCGACATACGTTTGCAAGTCACTTTATGATGAACGGGGGA 19897 ||||| | ||||| ||||| ||||||| ||||| || |||||||||||| || ||| Sbjct 2484 GGTCAGCGCACCCATGTGCTCAGACATACCTTTGCCAGCCACTTTATGATGCGAGGAGGA 2543 Query 19898 AACCTTTTAGTTTTGCAGCGGGTATTAGGCCATACAG-AC-ATAAAAATGACTATGCGAT 19955 ||| || | || || |||| | | || | |||| || || | ||||||||| ||| Sbjct 2544 AACATTCTGGTATTACAGCAAATTCTCGGGC--ACAGCACGATCATGATGACTATGAGAT 2601 Query 19956 ATGCTCACTTTGCGCCCGATCATCTAGA 19983 | |||||||| || || ||||||| || Sbjct 2602 ACGCTCACTTCGCTCCAAATCATCTTGA 2629 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 94480443275484