Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratosolen_20solmsi_20marchali_20[refseq_20GCF_5F000503995.1_202013 -12-04] 2,457 sequences; 277,059,195 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq25 107 2e-18 >seq25 Length=3995362 Score = 107 bits (118), Expect = 2e-18 Identities = 169/242 (70%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 ||||| || ||||| | ||||| |||||||| ||||| || || || ||||| ||||| Sbjct 523206 ACACCGATCGGACCCATTCCAGGGCCTCCACCGCCATGCGGTATGCAAAATGTTTTATGC 523265 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 | ||| || || |||| || ||||| || | ||| | || |||||||| || Sbjct 523266 AGATTGAGGTGTGATACGTCACTGCCATAATCGCCAGGTCTGCAGAGTCCTACCTGCGCG 523325 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362 || | ||| || ||||| | ||| || |||||||| | |||||| | | ||| | Sbjct 523326 TTCATATTCGCCCCATCTAAATAAACTTGACCACCGGCTTTATGAACAAGTTCACAAACG 523385 Query 138363 TGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGAG 138422 | | ||| | ||||| || || | ||||||||||| |||||||| | ||| ||| Sbjct 523386 TCGCCGATTGTCTCCTCAAACACGCCGTTCGTCGATGGATACGTAATCATTAAACACGAG 523445 Query 138423 AG 138424 || Sbjct 523446 AG 523447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578980617511640