Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratosolen_20solmsi_20marchali_20[refseq_20GCF_5F000503995.1_202013 -12-04] 2,457 sequences; 277,059,195 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq7 95.1 2e-14 >seq7 Length=10955212 Score = 95.1 bits (104), Expect = 2e-14 Identities = 162/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 47845 TCGACATAATCTCTGGCATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATAAA 47904 ||||||||||| || ||||||||||| || | ||||| | |||||||| || | Sbjct 3146983 TCGACATAATCCCTAGCATGTCCCCAATCTCTTTTAGCATCTAAATTTCCTA-ATTCCAC 3146925 Query 47905 CAG-TCTTGCTTACCTTCAGAGATTGCTTTTAAT-GCTCTTGTAATCTTACGAGTTACAA 47962 || || ||| ||| || | | || ||| | || |||||||||||||| |||| Sbjct 3146924 CATATCCTGCAATCCTA-AGTGTATTTTTGCAATTGACCTGGTAATCTTACGAGTCACAA 3146866 Query 47963 AAGTTTCACCACGTCTTGGAGATTCATGATTAAAAAGAATACCACTACAGGCATACATTC 48022 || |||||||||| | ||| ||| || || ||||| |||||| |||| ||| |||| Sbjct 3146865 AATTTTCACCACGCCGTGGGCTTTCGTGGTTGAAAAGTATACCATTACAAGCAAACATAT 3146806 Query 48023 CGTATGATTCACGATAGTTCTTTACTATCCAGTACCCATAGAGTTTTGCA 48072 ||| | ||| | ||| || | || ||||| | | ||| | ||| ||| Sbjct 3146805 TGTACGCTTCTCTATAATTTATAACAATCCAAAAACTATACATTTTGGCA 3146756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665473961003240