Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratosolen_20solmsi_20marchali_20[refseq_20GCF_5F000503995.1_202013 -12-04] 2,457 sequences; 277,059,195 total letters Query= NC_022066.1 Length=108297 Score E Sequences producing significant alignments: (Bits) Value seq647 118 7e-22 >seq647 Length=994 Score = 118 bits (130), Expect = 7e-22 Identities = 138/186 (74%), Gaps = 3/186 (2%) Strand=Plus/Minus Query 95166 CGGCACGTTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAG 95225 ||| | ||| | ||||||||| ||||||| || |||||||| || ||||| |||||||| Sbjct 910 CGGGATGTTCGCTTTGATAAGACCTGTGATAACGTCCACGGAAGGACGCTGGGTCGCCAG 851 Query 95226 GACGAGATGAATACCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGAC 95285 || || ||||||||||| || ||||| ||||| || | ||| ||| | ||| | Sbjct 850 CACAAGGTGAATACCGGCCGCACGCGCTTTCTGCGCCAGACGGGCAA---TCAACTCTTC 794 Query 95286 TTCTTTCTTGTAGCCGCCCATCATGAGGTCTGCGAGTTCGTCGACCACTACCACGATGTA 95345 | ||||||| || |||||| ||||| |||| ||| ||||||| || ||||| || Sbjct 793 TACTTTCTTACCAACGGTCATCATCAGGTCAGCGAATTCATCGACCAGCACGACGATATA 734 Query 95346 GGGGAG 95351 || || Sbjct 733 AGGCAG 728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346415226393666