Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratosolen_20solmsi_20marchali_20[refseq_20GCF_5F000503995.1_202013 -12-04] 2,457 sequences; 277,059,195 total letters Query= NC_023557.1 Length=271084 Score E Sequences producing significant alignments: (Bits) Value seq412 95.1 2e-14 seq282 91.5 3e-13 >seq412 Length=1338 Score = 95.1 bits (104), Expect = 2e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 165194 TCTATAGTTCAGTCGGTAGAACAGCGGACTGTTAATCCGTAGGTCGCTGGTTCGAATCCA 165253 ||| |||||||||||||||||| |||||||||||||||||| ||| ||||||||| |||| Sbjct 376 TCTGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCA 435 Query 165254 GCTAGACCAGCCAAA 165268 | ||| ||||||| Sbjct 436 GTCAGAGGAGCCAAA 450 >seq282 Length=1752 Score = 91.5 bits (100), Expect = 3e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 165194 TCTATAGTTCAGTCGGTAGAACAGCGGACTGTTAATCCGTAGGTCGCTGGTTCGAATCCA 165253 ||| |||||||||||||||||| ||||||||||||||||| ||| ||||||||| |||| Sbjct 1119 TCTGTAGTTCAGTCGGTAGAACGCCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCA 1060 Query 165254 GCTAGACCAGCCAAA 165268 | ||| ||||||| Sbjct 1059 GTCAGAGGAGCCAAA 1045 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 867314161795680