Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratosolen_20solmsi_20marchali_20[refseq_20GCF_5F000503995.1_202013 -12-04] 2,457 sequences; 277,059,195 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq13 87.8 2e-12 >seq13 Length=8037603 Score = 87.8 bits (96), Expect = 2e-12 Identities = 124/169 (73%), Gaps = 4/169 (2%) Strand=Plus/Plus Query 180476 GATATTGGTGTTAAAGTGTGGAATGATAATGGTTCGCGTAAGTTTTTAGATTCTTGTGGA 180535 |||| ||||| ||| | ||| ||| |||| || | |||||| | || || | ||| Sbjct 7607478 GATAAAGGTGTCAAAATTTGGGATGCCAATGCATCTAGAAAGTTTCTCGACTCAT-TGGG 7607536 Query 180536 TTTCATTT-TCGAAAAGAAGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGC 180594 |||||| | || | ||||| |||||||| || |||||||| ||||||||||||||| Sbjct 7607537 TTTCATCGATAGAGACGAAGGAGATTTAGGCCCGATTTATGGCTTTCAATGGAGACATTA 7607596 Query 180595 AGGAGCTCAATATATTGAC-TGTGATACCAACTATATCGGGCAAGGTAT 180642 || || |||| || ||| ||| |||| | |||| || |||||||| Sbjct 7607597 TGGTGCAAAATACATCGACATGT-ATACAGATTATACAGGCCAAGGTAT 7607644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655259874713000